RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 BNC2Q6ZN30 1099 aaPredicted RBP9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 NPAS3Q8IXF0 933 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 HMGCLL1Q8TB92 370 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 GDPD5Q8WTR4 605 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 FGF13Q92913 245 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 NXPE3Q969Y0 559 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 SPDL1Q96EA4 605 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 SERPINI1Q99574 410 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 ELOVL2Q9NXB9 296 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 ADA2Q9NZK5 511 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 FBXO10Q9UK96 956 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 TMPRSS11EQ9UL52 423 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 ANGPTL3Q9Y5C1 460 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 TNPO3Q9Y5L0 923 aaKnown RBP9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 RANBP2P49792 3224 aaKnown RBP9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 C16orf96A6NNT2 1141 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 AGAP14A8MT82 685 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 UPK3BL1B0FP48 263 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 PRRT4C9JH25 899 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 UPK3BL2E5RIL1 263 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 ATP1B2P14415 290 aaPredicted RBP9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 VCLP18206 1134 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 LBPP18428 481 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 GTF2H2Q13888 395 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 BOP1Q14137 746 aaKnown RBP9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 FNDC3BQ53EP0 1204 aaKnown RBP9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZNF805Q5CZA5 627 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 GTF2H2CQ6P1K8 395 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 MBOAT1Q6ZNC8 495 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 GOLGA7Q7Z5G4 137 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 MYLK4Q86YV6 388 aaPredicted RBP9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 PLPP6Q8IY26 295 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 PGAM4Q8N0Y7 254 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 VN1R2Q8NFZ6 395 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 METTL6Q8TCB7 284 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 DLG3Q92796 817 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 ULK4Q96C45 1275 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 ASB16Q96NS5 453 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 HBEGFQ99075 208 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 WRAP53Q9BUR4 548 aaKnown RBP9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 RIOK2Q9BVS4 552 aaKnown RBP9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 C1QTNF3Q9BXJ4 246 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 IPPKQ9H8X2 491 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 MRGBPQ9NV56 204 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 KCTD5Q9NXV2 234 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 WWOXQ9NZC7 414 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 STX18Q9P2W9 335 aaKnown RBP9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 ITM2BQ9Y287 266 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 OARD1Q9Y530 152 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 C5orf42Q9H799 3197 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 KLHL33A6NCF5 533 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 HEPACAM2A8MVW5 462 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 NR5A2O00482 541 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 TAPBPO15533 448 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 CAPN1P07384 714 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 SRPRAP08240 638 aaKnown RBP9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 ANPEPP15144 967 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZNF30P17039 623 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 DPP6P42658 865 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 CCNIQ14094 377 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 GRIN2CQ14957 1233 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 ACOX1Q15067 660 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 TAF11Q15544 211 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 DUSP6Q16828 381 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 REP15Q6BDI9 236 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 LETMD1Q6P1Q0 360 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 LRRC74BQ6ZQY2 392 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 SFTPA1Q8IWL2 248 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 MIER2Q8N344 545 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 BEND7Q8N7W2 519 aaPredicted RBP9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 FAM156AQ8NDB6 213 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 NRG4Q8WWG1 115 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 SMARCD2Q92925 531 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 SLC45A3Q96JT2 553 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZNF570Q96NI8 536 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 SAMD11Q96NU1 681 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 SFXN1Q9H9B4 322 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZDHHC4Q9NPG8 344 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 NDE1Q9NXR1 346 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 DEC1Q9P2X7 70 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 SARDHQ9UL12 918 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 PPM1HQ9ULR3 514 aa9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 PRPF19Q9UMS4 504 aaKnown RBP9.37□□□□□ -0.91
COL6A4P1-201ENST00000446690 MTCL1Q9Y4B5 1905 aaKnown RBP9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 OR2AG2A6NM03 316 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 RFXAPO00287 272 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 FBP2O00757 339 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 HOXC11O43248 304 aaPredicted RBP9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 NFATC1O95644 943 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 ASLP04424 464 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 ELFN1P0C7U0 828 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 MSH3P20585 1137 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 GPX3P22352 226 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 NFKBIAP25963 317 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 CCNG1P51959 295 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 THOP1P52888 689 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 METAP1P53582 386 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 DIO3P55073 304 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 NAA20P61599 178 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms