RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 SPNS2Q8IVW8 549 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 CEP97Q8IW35 865 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 CNPY4Q8N129 248 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 RIBC1Q8N443 379 aaPredicted RBP17.1■□□□□ 0.33
SGCE-206ENST00000445866 ASZ1Q8WWH4 475 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 SLC30A3Q99726 388 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 TIMM29Q9BSF4 260 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 LATS2Q9NRM7 1088 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 ZNF446Q9NWS9 450 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 APOBEC3BQ9UH17 382 aaKnown RBP17.1■□□□□ 0.33
SGCE-206ENST00000445866 GMEB2Q9UKD1 530 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 TLK1Q9UKI8 766 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 KCNK6Q9Y257 313 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 SDK1Q7Z5N4 2213 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 KLHL33A6NCF5 533 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 ARHGAP33O14559 1287 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 RGS16O15492 202 aaPredicted RBP17.1■□□□□ 0.33
SGCE-206ENST00000445866 APOA4P06727 396 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 SYPP08247 313 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 MYZAPP0CAP1 466 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 NME1P15531 152 aaKnown RBP17.1■□□□□ 0.33
SGCE-206ENST00000445866 CD9P21926 228 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 RAB10P61026 200 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 ILF3Q12906 894 aaKnown RBP eCLIP17.1■□□□□ 0.33
SGCE-206ENST00000445866 GRIK2Q13002 908 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 LRP8Q14114 963 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 BOP1Q14137 746 aaKnown RBP17.1■□□□□ 0.33
SGCE-206ENST00000445866 NFE2L1Q14494 772 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 HLA-BQ31612 363 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 SYTL3Q4VX76 610 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 PAQR3Q6TCH7 311 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 IL27RAQ6UWB1 636 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 CMC1Q7Z7K0 106 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 ZBTB2Q8N680 514 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 CCL4L1Q8NHW4 92 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 LMX1AQ8TE12 382 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 ELF4Q99607 663 aaPredicted RBP17.1■□□□□ 0.33
SGCE-206ENST00000445866 ZDHHC5Q9C0B5 715 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 OSGEPL1Q9H4B0 414 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 KLHL42Q9P2K6 505 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 GULP1Q9UBP9 304 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 GOLGA6L10A6NI86 522 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 FOXO6A8MYZ6 492 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 H3BM21 787 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 MAP2K7O14733 419 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 PHGDHO43175 533 aaKnown RBP17.09■□□□□ 0.33
SGCE-206ENST00000445866 LMNAP02545 664 aaKnown RBP17.09■□□□□ 0.33
SGCE-206ENST00000445866 AK4P27144 223 aaPredicted RBP17.09■□□□□ 0.33
SGCE-206ENST00000445866 NBL1P41271 181 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 ARRB1P49407 418 aaPredicted RBP17.09■□□□□ 0.33
SGCE-206ENST00000445866 SERPINB8P50452 374 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 ZNF460Q14592 562 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 PPM1JQ5JR12 505 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 TIFABQ6ZNK6 161 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 FAM83HQ6ZRV2 1179 aaPredicted RBP17.09■□□□□ 0.33
SGCE-206ENST00000445866 TAF8Q7Z7C8 310 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 OXR1Q8N573 874 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 LILRA3Q8N6C8 439 aaPredicted RBP17.09■□□□□ 0.33
SGCE-206ENST00000445866 HM13Q8TCT9 377 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 TMEM159Q96B96 161 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 GPAMQ9HCL2 828 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 SNX15Q9NRS6 342 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 SPASTQ9UBP0 616 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 LGALS13Q9UHV8 139 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 ST14Q9Y5Y6 855 aa17.09■□□□□ 0.33
SGCE-206ENST00000445866 A0A1W2PPM1 405 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 TPP1O14773 563 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 LIN7AO14910 233 aaPredicted RBP17.08■□□□□ 0.32
SGCE-206ENST00000445866 SNX2O60749 519 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 CACNA1HO95180 2353 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 ALDOAP04075 364 aaKnown RBP17.08■□□□□ 0.32
SGCE-206ENST00000445866 IDSP22304 550 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 RXRGP48443 463 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 PLOD1Q02809 727 aaPredicted RBP17.08■□□□□ 0.32
SGCE-206ENST00000445866 ELOCQ15369 112 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 TTLL9Q3SXZ7 439 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 PLA2G2CQ5R387 149 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 PLEKHS1Q5SXH7 462 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 METRNLQ641Q3 311 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 SLC30A9Q6PML9 568 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 CD200R1Q8TD46 325 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 GPBAR1Q8TDU6 330 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 GTPBP2Q9BX10 602 aaKnown RBP17.08■□□□□ 0.32
SGCE-206ENST00000445866 GSDMCQ9BYG8 508 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 GAREM1Q9H706 876 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 EURLQ9NYK6 297 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 HCN4Q9Y3Q4 1203 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 VPS13AQ96RL7 3174 aa17.08■□□□□ 0.32
SGCE-206ENST00000445866 SLC5A10A0PJK1 596 aa17.07■□□□□ 0.32
SGCE-206ENST00000445866 AGPSO00116 658 aa17.07■□□□□ 0.32
SGCE-206ENST00000445866 DFNA5O60443 496 aa17.07■□□□□ 0.32
SGCE-206ENST00000445866 SDC3O75056 442 aa17.07■□□□□ 0.32
SGCE-206ENST00000445866 GPC4O75487 556 aa17.07■□□□□ 0.32
SGCE-206ENST00000445866 RFPL1O75677 317 aa17.07■□□□□ 0.32
SGCE-206ENST00000445866 SASH3O75995 380 aa17.07■□□□□ 0.32
SGCE-206ENST00000445866 C2P06681 752 aa17.07■□□□□ 0.32
SGCE-206ENST00000445866 DGKAP23743 735 aa17.07■□□□□ 0.32
SGCE-206ENST00000445866 ACTR1BP42025 376 aa17.07■□□□□ 0.32
SGCE-206ENST00000445866 PREPP48147 710 aa17.07■□□□□ 0.32
SGCE-206ENST00000445866 IL2P60568 153 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms