RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 ROPN1BQ9BZX4 212 aaPredicted RBP15.51■□□□□ 0.07
USP40-206ENST00000443711 ROPN1Q9HAT0 212 aaPredicted RBP15.51■□□□□ 0.07
USP40-206ENST00000443711 SEMA4GQ9NTN9 838 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 SPATS2LQ9NUQ6 558 aaKnown RBP15.51■□□□□ 0.07
USP40-206ENST00000443711 TAS2R13Q9NYV9 303 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 PLEKHM1Q9Y4G2 1056 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 OTOGLQ3ZCN5 2332 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 LIN7AO14910 233 aaPredicted RBP15.5■□□□□ 0.07
USP40-206ENST00000443711 AQP9O43315 295 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 FOXD2O60548 495 aaPredicted RBP15.5■□□□□ 0.07
USP40-206ENST00000443711 KRT37O76014 449 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 APOA4P06727 396 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 SAT1P21673 171 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 IDSP22304 550 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 DGKAP23743 735 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 AOAHP28039 575 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 CCR7P32248 378 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 CCT8P50990 548 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 CDKN2DP55273 166 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 PLOD1Q02809 727 aaPredicted RBP15.5■□□□□ 0.07
USP40-206ENST00000443711 DMPKQ09013 629 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 BNIP3Q12983 259 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 SF3A2Q15428 464 aaKnown RBP15.5■□□□□ 0.07
USP40-206ENST00000443711 SHBQ15464 509 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 FBXO38Q6PIJ6 1188 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 OTOAQ7RTW8 1153 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 TAF8Q7Z7C8 310 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 GKN2Q86XP6 184 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 TDRPQ86YL5 185 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 CFAP206Q8IYR0 622 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 IQCKQ8N0W5 287 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 ZNF548Q8NEK5 533 aaPredicted RBP15.5■□□□□ 0.07
USP40-206ENST00000443711 OR2W6PQ8NHA6 318 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 INPP5DQ92835 1189 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 TSPAN17Q96FV3 270 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 GPR21Q99679 349 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 SARS2Q9NP81 518 aaKnown RBP15.5■□□□□ 0.07
USP40-206ENST00000443711 KLHL42Q9P2K6 505 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 PSMC3IPQ9P2W1 217 aaPredicted RBP15.5■□□□□ 0.07
USP40-206ENST00000443711 SLC39A10Q9ULF5 831 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 KCNK6Q9Y257 313 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 DNAJC16Q9Y2G8 782 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 DHRS7Q9Y394 339 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 CSNK1G3Q9Y6M4 447 aa15.5■□□□□ 0.07
USP40-206ENST00000443711 ARHGEF17Q96PE2 2063 aaPredicted RBP15.5■□□□□ 0.07
USP40-206ENST00000443711 LNP1A1A4G5 178 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 NEMP2A6NFY4 417 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 RASGRF2O14827 1237 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 ANXA6P08133 673 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 SNRPAP09012 282 aaKnown RBP15.49■□□□□ 0.07
USP40-206ENST00000443711 FDXRP22570 491 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 AK4P27144 223 aaPredicted RBP15.49■□□□□ 0.07
USP40-206ENST00000443711 EPHA8P29322 1005 aaPredicted RBP15.49■□□□□ 0.07
USP40-206ENST00000443711 ACTR1BP42025 376 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 CLCN7P51798 805 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 TAS2R39P59534 338 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 ACTR1AP61163 376 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 RPA4Q13156 261 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 BOP1Q14137 746 aaKnown RBP15.49■□□□□ 0.07
USP40-206ENST00000443711 NFE2L1Q14494 772 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 USP10Q14694 798 aaKnown RBP15.49■□□□□ 0.07
USP40-206ENST00000443711 RASA2Q15283 850 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 TTLL9Q3SXZ7 439 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 ZNF658BQ4V348 819 aaPredicted RBP15.49■□□□□ 0.07
USP40-206ENST00000443711 SYTL3Q4VX76 610 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 PLEKHS1Q5SXH7 462 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 MROH9Q5TGP6 573 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 METRNLQ641Q3 311 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 NRROSQ86YC3 692 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 DCLK2Q8N568 766 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 MINDY1Q8N5J2 469 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 ZBTB2Q8N680 514 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 ACVR1CQ8NER5 493 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 CCL4L1Q8NHW4 92 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 ASZ1Q8WWH4 475 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 TMEM109Q9BVC6 243 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 OSGEPL1Q9H4B0 414 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 CAAP1Q9H8G2 361 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 IL21RQ9HBE5 538 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 GALPQ9UBC7 116 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 GULP1Q9UBP9 304 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 FAM8A1Q9UBU6 413 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 RAPGEFL1Q9UHV5 662 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 TRMT6Q9UJA5 497 aaKnown RBP15.49■□□□□ 0.07
USP40-206ENST00000443711 ACSL5Q9ULC5 683 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 DOLKQ9UPQ8 538 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 MED16Q9Y2X0 877 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 NFS1Q9Y697 457 aa15.49■□□□□ 0.07
USP40-206ENST00000443711 IQANK1A0A1B0GTG1 560 aa15.48■□□□□ 0.07
USP40-206ENST00000443711 SLC5A10A0PJK1 596 aa15.48■□□□□ 0.07
USP40-206ENST00000443711 TLDC2A0PJX2 215 aa15.48■□□□□ 0.07
USP40-206ENST00000443711 PRR19A6NJB7 356 aa15.48■□□□□ 0.07
USP40-206ENST00000443711 SMIM23A6NLE4 172 aa15.48■□□□□ 0.07
USP40-206ENST00000443711 LMO7DNF2Z398 122 aa15.48■□□□□ 0.07
USP40-206ENST00000443711 SDC3O75056 442 aa15.48■□□□□ 0.07
USP40-206ENST00000443711 CDH16O75309 829 aa15.48■□□□□ 0.07
USP40-206ENST00000443711 GPC4O75487 556 aa15.48■□□□□ 0.07
USP40-206ENST00000443711 ZNF883P0CG24 379 aa15.48■□□□□ 0.07
USP40-206ENST00000443711 STMN1P16949 149 aa15.48■□□□□ 0.07
USP40-206ENST00000443711 SLCO1A2P46721 670 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms