RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 TAAR9Q96RI9 348 aa20.63■□□□□ 0.89
CDKN3-204ENST00000442975 OGFRQ9NZT2 677 aa20.63■□□□□ 0.89
CDKN3-204ENST00000442975 PDP2Q9P2J9 529 aa20.63■□□□□ 0.89
CDKN3-204ENST00000442975 ACSL6Q9UKU0 697 aa20.63■□□□□ 0.89
CDKN3-204ENST00000442975 ZKSCAN5Q9Y2L8 839 aa20.63■□□□□ 0.89
CDKN3-204ENST00000442975 UNC13CQ8NB66 2214 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 CACNA1GO43497 2377 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 MROH6A6NGR9 719 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 OR51F1A6NGY5 319 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 AGAP14A8MT82 685 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 H7C0S8 307 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 SGTAO43765 313 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 RASSF9O75901 435 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 SUN1O94901 812 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 POLBP06746 335 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 MTHFD1P11586 935 aaKnown RBP20.62■□□□□ 0.89
CDKN3-204ENST00000442975 ATP1B2P14415 290 aaPredicted RBP20.62■□□□□ 0.89
CDKN3-204ENST00000442975 MSNP26038 577 aaKnown RBP20.62■□□□□ 0.89
CDKN3-204ENST00000442975 RPL22P35268 128 aaKnown RBP20.62■□□□□ 0.89
CDKN3-204ENST00000442975 PRLHRP49683 370 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 ARSDP51689 593 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 BASP1P80723 227 aaKnown RBP20.62■□□□□ 0.89
CDKN3-204ENST00000442975 CACNG1Q06432 222 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 KCTD19Q17RG1 926 aaPredicted RBP20.62■□□□□ 0.89
CDKN3-204ENST00000442975 SKIDA1Q1XH10 827 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 METRNLQ641Q3 311 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 PIANPQ8IYJ0 282 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 CFAP206Q8IYR0 622 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 HM13Q8TCT9 377 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 CDKN2AIPNLQ96HQ2 116 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 C12orf66Q96MD2 445 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 PCDHB11Q9Y5F2 797 aa20.62■□□□□ 0.89
CDKN3-204ENST00000442975 PTPRQQ9UMZ3 2332 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 HEATR9A2RTY3 570 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 B4E171 279 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 CAPN5O15484 640 aaPredicted RBP20.61■□□□□ 0.89
CDKN3-204ENST00000442975 TSPAN7P41732 249 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 KCNJ1P48048 391 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 LEPRP48357 1165 aaKnown RBP20.61■□□□□ 0.89
CDKN3-204ENST00000442975 GSE1Q14687 1217 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 DBN1Q16643 649 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 ANKS6Q68DC2 871 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 IRGCQ6NXR0 463 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 DRICH1Q6PGQ1 229 aaPredicted RBP20.61■□□□□ 0.89
CDKN3-204ENST00000442975 CCDC81Q6ZN84 652 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 VASH2Q86V25 355 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 LILRA3Q8N6C8 439 aaPredicted RBP20.61■□□□□ 0.89
CDKN3-204ENST00000442975 SPDYE1Q8NFV5 336 aaPredicted RBP20.61■□□□□ 0.89
CDKN3-204ENST00000442975 LINC00615Q96LM1 132 aaPredicted RBP20.61■□□□□ 0.89
CDKN3-204ENST00000442975 RMDN2Q96LZ7 410 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 CCNL2Q96S94 520 aaPredicted RBP20.61■□□□□ 0.89
CDKN3-204ENST00000442975 CTRCQ99895 268 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 VPS37BQ9H9H4 285 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 SMARCAL1Q9NZC9 954 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 ACSL5Q9ULC5 683 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 B3GALT1Q9Y5Z6 326 aa20.61■□□□□ 0.89
CDKN3-204ENST00000442975 TRBV5-4A0A0C4DH59 114 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 CCDC162PA2VCL2 907 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 KLHL33A6NCF5 533 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 STMND1H3BQB6 276 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 CD82P27701 267 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 SEPHS1P49903 392 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 RAB15P59190 212 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 VAC14Q08AM6 782 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 SRSF6Q13247 344 aaKnown RBP20.6■□□□□ 0.89
CDKN3-204ENST00000442975 LAMB3Q13751 1172 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 DCAF12Q5T6F0 453 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 FAM92BQ6ZTR7 304 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 ARHGAP22Q7Z5H3 698 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 CLDN19Q8N6F1 224 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 PPHLN1Q8NEY8 458 aaKnown RBP20.6■□□□□ 0.89
CDKN3-204ENST00000442975 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.6■□□□□ 0.89
CDKN3-204ENST00000442975 C9orf72Q96LT7 481 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 UBL7Q96S82 380 aaPredicted RBP20.6■□□□□ 0.89
CDKN3-204ENST00000442975 DDA1Q9BW61 102 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 CASS4Q9NQ75 786 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 SLC2A6Q9UGQ3 507 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 PCDHGA3Q9Y5H0 932 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 IGSF10Q6WRI0 2623 aa20.6■□□□□ 0.89
CDKN3-204ENST00000442975 IGLV3-16A0A075B6K0 115 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 TERF1P54274 439 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 SESN2P58004 480 aaPredicted RBP20.59■□□□□ 0.89
CDKN3-204ENST00000442975 KRT33BQ14525 404 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 MANEAQ5SRI9 462 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 TSTD2Q5T7W7 516 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 AFTPHQ6ULP2 937 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 BMPERQ8N8U9 685 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 PRELID2Q8N945 189 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 OR13J1Q8NGT2 312 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 ZDHHC12Q96GR4 267 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 INSM2Q96T92 566 aaPredicted RBP20.59■□□□□ 0.89
CDKN3-204ENST00000442975 ASPSCR1Q9BZE9 553 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 EIF2B3Q9NR50 452 aaKnown RBP20.59■□□□□ 0.89
CDKN3-204ENST00000442975 HOMER3Q9NSC5 361 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 JRKLQ9Y4A0 524 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 TCAF1Q9Y4C2 921 aa20.59■□□□□ 0.89
CDKN3-204ENST00000442975 ZFC3H1O60293 1989 aaKnown RBP20.59■□□□□ 0.89
CDKN3-204ENST00000442975 ZNF106Q9H2Y7 1883 aaKnown RBP20.58■□□□□ 0.89
CDKN3-204ENST00000442975 SMG1Q96Q15 3661 aaKnown RBP20.58■□□□□ 0.89
CDKN3-204ENST00000442975 TEX51A0A1B0GUA7 166 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms