RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 MSH3P20585 1137 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 PTPN4P29074 926 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 AKT1P31749 480 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 CDKN2BP42772 138 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 DYNLT1P63172 113 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 XRCC4Q13426 336 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 SEMA5AQ13591 1074 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 SLC1A5Q15758 541 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 TAZQ16635 292 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 KHDC1Q4VXA5 237 aaKnown RBP13.5□□□□□ -0.25
PTPRE-203ENST00000442830 TFDP3Q5H9I0 405 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 SIRPB2Q5JXA9 342 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 ATP1A1-AS1Q5TC04 95 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 METRNLQ641Q3 311 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 KDELC1Q6UW63 502 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 NPNTQ6UXI9 565 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 FAM151BQ6UXP7 276 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 D2HGDHQ8N465 521 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 TTC30BQ8N4P2 665 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 EFCAB3Q8N7B9 438 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 CT55Q8WUE5 264 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 HEXDCQ8WVB3 486 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 RNF25Q96BH1 459 aaPredicted RBP13.5□□□□□ -0.25
PTPRE-203ENST00000442830 ELMO2Q96JJ3 720 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 LRFN5Q96NI6 719 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 CCM2Q9BSQ5 444 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 ACTL8Q9H568 366 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 ABHD10Q9NUJ1 306 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 TMPRSS11EQ9UL52 423 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 WDR37Q9Y2I8 494 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 SPO11Q9Y5K1 396 aa13.5□□□□□ -0.25
PTPRE-203ENST00000442830 USP9YO00507 2555 aaPredicted RBP13.5□□□□□ -0.25
PTPRE-203ENST00000442830 RELNP78509 3460 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 IGHV5-51A0A0C4DH38 117 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 MGAT4DA6NG13 374 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 AURKAO14965 403 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 STX7O15400 261 aaKnown RBP13.49□□□□□ -0.25
PTPRE-203ENST00000442830 KIF1CO43896 1103 aaKnown RBP13.49□□□□□ -0.25
PTPRE-203ENST00000442830 CST8O60676 142 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 VPS4BO75351 444 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 SLC35G4P0C7Q5 338 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 NFKB1P19838 968 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 PGDP52209 483 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 GEMP55040 296 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 HADHBP55084 474 aaKnown RBP13.49□□□□□ -0.25
PTPRE-203ENST00000442830 PRKAA1Q13131 559 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 CHRNA6Q15825 494 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 IGFBP7Q16270 282 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 BCL7AQ4VC05 210 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 GPRC6AQ5T6X5 926 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 IZUMO3Q5VZ72 239 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 ITPRIPL1Q6GPH6 555 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 PWWP2BQ6NUJ5 590 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 TMEM220Q6QAJ8 160 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 MFSD7Q6UXD7 560 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 PID1Q7Z2X4 250 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 CNGA4Q8IV77 575 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 RASGEF1AQ8N9B8 481 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 OR2L2Q8NH16 312 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 BLOC1S5Q8TDH9 187 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 RBM41Q96IZ5 413 aaKnown RBP13.49□□□□□ -0.25
PTPRE-203ENST00000442830 KIR3DX1Q9H7L2 352 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 NHEJ1Q9H9Q4 299 aaPredicted RBP13.49□□□□□ -0.25
PTPRE-203ENST00000442830 LUC7LQ9NQ29 371 aaKnown RBP13.49□□□□□ -0.25
PTPRE-203ENST00000442830 UBP1Q9NZI7 540 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 TRIM10Q9UDY6 481 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 TLK1Q9UKI8 766 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 VPS4AQ9UN37 437 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 SEC16AO15027 2179 aa13.49□□□□□ -0.25
PTPRE-203ENST00000442830 C5orf60A6NFR6 353 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 CFAP99D6REC4 459 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 ZRANB2O95218 330 aaKnown RBP eCLIP13.48□□□□□ -0.25
PTPRE-203ENST00000442830 PRAMEF1O95521 474 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 RAB40ALP0C0E4 278 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 MSL3P1P0C860 447 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 FOLR1P15328 257 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 LPOP22079 712 aaPredicted RBP13.48□□□□□ -0.25
PTPRE-203ENST00000442830 CD68P34810 354 aaPredicted RBP13.48□□□□□ -0.25
PTPRE-203ENST00000442830 WASHC5Q12768 1159 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 KRT33BQ14525 404 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 ZNF449Q6P9G9 518 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 SPOCD1Q6ZMY3 1216 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 TMEM126BQ8IUX1 230 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 KATNAL2Q8IYT4 538 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 RCOR2Q8IZ40 523 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 GALNT11Q8NCW6 608 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 IPMKQ8NFU5 416 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 GPR150Q8NGU9 434 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 ZNF398Q8TD17 642 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 CPT1BQ92523 772 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 ULK4Q96C45 1275 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 DCUN1D1Q96GG9 259 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 CALR3Q96L12 384 aaKnown RBP13.48□□□□□ -0.25
PTPRE-203ENST00000442830 MRGPRX2Q96LB1 330 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 LINC00615Q96LM1 132 aaPredicted RBP13.48□□□□□ -0.25
PTPRE-203ENST00000442830 C12orf66Q96MD2 445 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 QKIQ96PU8 341 aaKnown RBP eCLIP13.48□□□□□ -0.25
PTPRE-203ENST00000442830 MAP3K3Q99759 626 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 VPS37BQ9H9H4 285 aa13.48□□□□□ -0.25
PTPRE-203ENST00000442830 ACSS2Q9NR19 701 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms