RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 BLOC1S5Q8TDH9 187 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 KLHL6Q8WZ60 621 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 TGM7Q96PF1 710 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 QKIQ96PU8 341 aaKnown RBP eCLIP7.63□□□□□ -1.19
CD44-211ENST00000442151 PANX2Q96RD6 677 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 TBC1D10AQ9BXI6 508 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 FANCEQ9HB96 536 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 SLC40A1Q9NP59 571 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 SMOXQ9NWM0 555 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 KLHL3Q9UH77 587 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 RARRES3Q9UL19 164 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 G3BP2Q9UN86 482 aaKnown RBP7.63□□□□□ -1.19
CD44-211ENST00000442151 PCDHA3Q9Y5H8 950 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 ST14Q9Y5Y6 855 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 EPN1Q9Y6I3 576 aaPredicted RBP7.63□□□□□ -1.19
CD44-211ENST00000442151 SLC30A1Q9Y6M5 507 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 KIF26BQ2KJY2 2108 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 SCN8AQ9UQD0 1980 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 hCG_1818297A0A087WSY0 165 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 A0A0U1RQS6 177 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 C17orf113A0A1B0GUU1 675 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 UBA6A0AVT1 1052 aaPredicted RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 MGAT4DA6NG13 374 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 BTNL10A8MVZ5 291 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 GOLGA6L6A8MZA4 724 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 C21orf140B9A014 251 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 CASC3O15234 703 aaKnown RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 EML2O95834 649 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 CD63P08962 238 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 PIRTP0C851 137 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 TYRP1P17643 537 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 FECHP22830 423 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 PPARGP37231 505 aaPredicted RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 PLOD1Q02809 727 aaPredicted RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 WASHC5Q12768 1159 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 IHHQ14623 411 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 PLCL1Q15111 1095 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 CHRNA6Q15825 494 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 GPR33Q49SQ1 333 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 IRGCQ6NXR0 463 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 HOOK3Q86VS8 718 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 OOSP2Q86WS3 158 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 ZNF567Q8N184 647 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 JPH3Q8WXH2 748 aaPredicted RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 SMIM14Q96QK8 99 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 OR6C1Q96RD1 312 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 GPR87Q9BY21 358 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 CEP41Q9BYV8 373 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 ULBP3Q9BZM4 244 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 SPRY4Q9C004 299 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 GBA3Q9H227 469 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 ASB8Q9H765 288 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 BPIFA1Q9NP55 256 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 IL26Q9NPH9 171 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 UBP1Q9NZI7 540 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 ZNF624Q9P2J8 865 aaPredicted RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 IL17BQ9UHF5 180 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 RPS6KL1Q9Y6S9 549 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 GCN1Q92616 2671 aaKnown RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 BPTFQ12830 3046 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 MKRN2OSH3BPM6 223 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 IFRD1O00458 451 aaPredicted RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 SUV39H1O43463 412 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 NDUFA10O95299 355 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 KLK3P07288 261 aaPredicted RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 SLC35G4P0C7Q5 338 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 NELFEP18615 380 aaKnown RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 ITGALP20701 1170 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 PTPN7P35236 360 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 STAT5AP42229 794 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 CAPZBP47756 277 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 EIF3EP60228 445 aaKnown RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 RPS15P62841 145 aaKnown RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 ADCY2Q08462 1091 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 CDC20Q12834 499 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 NOMO1Q15155 1222 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 PLA2G4EQ3MJ16 856 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 GPRC6AQ5T6X5 926 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 METRNLQ641Q3 311 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 CPNE8Q86YQ8 564 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 TTC30BQ8N4P2 665 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 OR2L2Q8NH16 312 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 C9orf43Q8TAL5 461 aaPredicted RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 LRRN4Q8WUT4 740 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 THAP4Q8WY91 577 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 EID2BQ96D98 161 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 LINC00615Q96LM1 132 aaPredicted RBP7.62□□□□□ -1.19
CD44-211ENST00000442151 CTRCQ99895 268 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 OSBPL8Q9BZF1 889 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 ARFGAP3Q9NP61 516 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 TMEM9Q9P0T7 183 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 SLC23A2Q9UGH3 650 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 CRLS1Q9UJA2 301 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 AMFRQ9UKV5 643 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 POLHQ9Y253 713 aa7.62□□□□□ -1.19
CD44-211ENST00000442151 GOLGA6L3A6NEY3 463 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 MIF4GDA9UHW6 222 aaKnown RBP7.61□□□□□ -1.19
CD44-211ENST00000442151 SPAG6O75602 509 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 SRP72O76094 671 aaKnown RBP7.61□□□□□ -1.19
CD44-211ENST00000442151 DLGAP3O95886 979 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms