RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ZNF549Q6P9A3 640 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 SPATA19Q7Z5L4 167 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 SLC22A15Q8IZD6 547 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 PROKR1Q8TCW9 393 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 TSPEARQ8WU66 669 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 DHRS1Q96LJ7 313 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 SLIRPQ9GZT3 109 aaKnown RBP20.03■□□□□ 0.8
SHOX2-203ENST00000441443 NAALAD2Q9Y3Q0 740 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 MATN3O15232 486 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 ANGPTL1O95841 491 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 DGKQP52824 942 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 ITKQ08881 620 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 LCP2Q13094 533 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 TOP3AQ13472 1001 aaPredicted RBP20.02■□□□□ 0.8
SHOX2-203ENST00000441443 CAMK2BQ13554 666 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 PAN2Q504Q3 1202 aaKnown RBP20.02■□□□□ 0.8
SHOX2-203ENST00000441443 COLEC12Q5KU26 742 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 GALNT5Q7Z7M9 940 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 FNDC5Q8NAU1 212 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 ZNF300Q96RE9 604 aaPredicted RBP20.02■□□□□ 0.8
SHOX2-203ENST00000441443 HBEGFQ99075 208 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 CPNE5Q9HCH3 593 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 DNAJB9Q9UBS3 223 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 MIA3Q5JRA6 1907 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 PRMT5O14744 637 aaPredicted RBP20.02■□□□□ 0.8
SHOX2-203ENST00000441443 FADS2O95864 444 aaKnown RBP20.02■□□□□ 0.8
SHOX2-203ENST00000441443 GSNP06396 782 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 IL1RL1Q01638 556 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 NPTX1Q15818 432 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 FXNQ16595 210 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.02■□□□□ 0.8
SHOX2-203ENST00000441443 ZNF691Q5VV52 312 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 DLEU7Q6UYE1 221 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 USP43Q70EL4 1123 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 PHF10Q8WUB8 498 aaKnown RBP20.02■□□□□ 0.8
SHOX2-203ENST00000441443 UPF1Q92900 1129 aaKnown RBP eCLIP20.02■□□□□ 0.8
SHOX2-203ENST00000441443 PARK7Q99497 189 aaKnown RBP20.02■□□□□ 0.8
SHOX2-203ENST00000441443 NEK6Q9HC98 313 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 PRDM8Q9NQV8 689 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 IPPQ9Y573 584 aa20.02■□□□□ 0.8
SHOX2-203ENST00000441443 ILVBLA1L0T0 632 aa20.02■□□□□ 0.79
SHOX2-203ENST00000441443 ENPP3O14638 875 aa20.02■□□□□ 0.79
SHOX2-203ENST00000441443 MITFO75030 526 aaPredicted RBP20.02■□□□□ 0.79
SHOX2-203ENST00000441443 GUCY1B2O75343 617 aa20.02■□□□□ 0.79
SHOX2-203ENST00000441443 UPK1BO75841 260 aa20.02■□□□□ 0.79
SHOX2-203ENST00000441443 CYP4B1P13584 511 aa20.02■□□□□ 0.79
SHOX2-203ENST00000441443 SERPINH1P50454 418 aaKnown RBP20.02■□□□□ 0.79
SHOX2-203ENST00000441443 TIAL1Q01085 375 aaKnown RBP eCLIP20.02■□□□□ 0.79
SHOX2-203ENST00000441443 TRIP4Q15650 581 aaPredicted RBP20.02■□□□□ 0.79
SHOX2-203ENST00000441443 STEAP3Q658P3 488 aa20.02■□□□□ 0.79
SHOX2-203ENST00000441443 PM20D1Q6GTS8 502 aa20.02■□□□□ 0.79
SHOX2-203ENST00000441443 TAS2R42Q7RTR8 314 aa20.02■□□□□ 0.79
SHOX2-203ENST00000441443 CCDC117Q8IWD4 279 aaPredicted RBP20.02■□□□□ 0.79
SHOX2-203ENST00000441443 FAM83FQ8NEG4 500 aaPredicted RBP20.02■□□□□ 0.79
SHOX2-203ENST00000441443 PJA1Q8NG27 643 aa20.02■□□□□ 0.79
SHOX2-203ENST00000441443 GTF3C2Q8WUA4 911 aaPredicted RBP20.02■□□□□ 0.79
SHOX2-203ENST00000441443 YIPF6Q96EC8 236 aa20.02■□□□□ 0.79
SHOX2-203ENST00000441443 RDH12Q96NR8 316 aa20.02■□□□□ 0.79
SHOX2-203ENST00000441443 RBM4BQ9BQ04 359 aaKnown RBP20.02■□□□□ 0.79
SHOX2-203ENST00000441443 RBM4Q9BWF3 364 aaKnown RBP20.02■□□□□ 0.79
SHOX2-203ENST00000441443 PCDHGA10Q9Y5H3 936 aa20.02■□□□□ 0.79
SHOX2-203ENST00000441443 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.01■□□□□ 0.79
SHOX2-203ENST00000441443 GGT1P19440 569 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 AGTR2P50052 363 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 LILRA4P59901 499 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 ATP6AP1LQ52LC2 224 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 LINC00299Q6ZSB3 139 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 TAC4Q86UU9 113 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 PLD3Q8IV08 490 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 MCFD2Q8NI22 146 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 ATOH8Q96SQ7 321 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 SMOQ99835 787 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 CLSTN3Q9BQT9 956 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 C17orf80Q9BSJ5 609 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 CEP44Q9C0F1 390 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 NACA2Q9H009 215 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 GSTA4O15217 222 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 DNAJB5O75953 348 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 PRR35P0CG20 571 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 ITGB6P18564 788 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 GTF2E2P29084 291 aaKnown RBP20.01■□□□□ 0.79
SHOX2-203ENST00000441443 CDC20Q12834 499 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 SYVN1Q86TM6 617 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 OR10Q1Q8NGQ4 319 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 LPPQ93052 612 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 LGALS12Q96DT0 336 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 ADGRE2Q9UHX3 823 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 PCDHGA3Q9Y5H0 932 aa20.01■□□□□ 0.79
SHOX2-203ENST00000441443 F2P00734 622 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 CD4P01730 458 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 MASP1P48740 699 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 SIM2Q14190 667 aaPredicted RBP20■□□□□ 0.79
SHOX2-203ENST00000441443 CLCA4Q14CN2 919 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 LAPTM4AQ15012 233 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 VARS2Q5ST30 1063 aaKnown RBP20■□□□□ 0.79
SHOX2-203ENST00000441443 DESI1Q6ICB0 168 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 FBXO39Q8N4B4 442 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 SLC47A1Q96FL8 570 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 TBATAQ96M53 351 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 ZNF560Q96MR9 790 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms