RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 EPB41L1Q9H4G0 881 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 UCK1Q9HA47 277 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 SLC40A1Q9NP59 571 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 HOMER3Q9NSC5 361 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 OCIAD1Q9NX40 245 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 SMARCAL1Q9NZC9 954 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 FOXJ2Q9P0K8 574 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 SLC2A6Q9UGQ3 507 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 DSPP15924 2871 aaKnown RBP13.46□□□□□ -0.25
LTBR-202ENST00000440421 IGLV3-16A0A075B6K0 115 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 EFCAB7A8K855 629 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 C9orf172C9J069 976 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 NVLO15381 856 aaKnown RBP13.45□□□□□ -0.26
LTBR-202ENST00000440421 SLC35G4P0C7Q5 338 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 ADRA1DP25100 572 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 PRLHRP49683 370 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 VPS41P49754 854 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 GFERP55789 205 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 SESN2P58004 480 aaPredicted RBP13.45□□□□□ -0.26
LTBR-202ENST00000440421 CXADRP78310 365 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 GSE1Q14687 1217 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 TGIF1Q15583 401 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 TSTD2Q5T7W7 516 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 TMEM164Q5U3C3 297 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 BROXQ5VW32 411 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 C4orf22Q6V702 233 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 ZFAND4Q86XD8 727 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 PLXDC1Q8IUK5 500 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 RASGEF1CQ8N431 466 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 CLDN19Q8N6F1 224 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 PPHLN1Q8NEY8 458 aaKnown RBP13.45□□□□□ -0.26
LTBR-202ENST00000440421 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
LTBR-202ENST00000440421 OR13J1Q8NGT2 312 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 RSC1A1Q92681 617 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 ART4Q93070 314 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 HDAC10Q969S8 669 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 PMEPA1Q969W9 287 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 PBKQ96KB5 322 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 LINC00615Q96LM1 132 aaPredicted RBP13.45□□□□□ -0.26
LTBR-202ENST00000440421 C12orf66Q96MD2 445 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 ZNF778Q96MU6 729 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 FCRL3Q96P31 734 aaPredicted RBP13.45□□□□□ -0.26
LTBR-202ENST00000440421 TGM7Q96PF1 710 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 RANBP9Q96S59 729 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 INSM2Q96T92 566 aaPredicted RBP13.45□□□□□ -0.26
LTBR-202ENST00000440421 DPH1Q9BZG8 443 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 CPNE5Q9HCH3 593 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 EIF2B3Q9NR50 452 aaKnown RBP13.45□□□□□ -0.26
LTBR-202ENST00000440421 PDP2Q9P2J9 529 aa13.45□□□□□ -0.26
LTBR-202ENST00000440421 TTC7AQ9ULT0 858 aaPredicted RBP13.45□□□□□ -0.26
LTBR-202ENST00000440421 KIF5CO60282 957 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 GOT2P00505 430 aaKnown RBP13.44□□□□□ -0.26
LTBR-202ENST00000440421 MTHFD1P11586 935 aaKnown RBP13.44□□□□□ -0.26
LTBR-202ENST00000440421 PSMA3P25788 255 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 FOXN2P32314 431 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 LEPRP48357 1165 aaKnown RBP13.44□□□□□ -0.26
LTBR-202ENST00000440421 CRADDP78560 199 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 CLN3Q13286 438 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 LAMB3Q13751 1172 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 PLCL1Q15111 1095 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 TTC27Q6P3X3 843 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 XKR5Q6UX68 686 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 ARHGAP22Q7Z5H3 698 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 RBM12BQ8IXT5 1001 aaKnown RBP13.44□□□□□ -0.26
LTBR-202ENST00000440421 HM13Q8TCT9 377 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 COG1Q8WTW3 980 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 MAGOHBQ96A72 148 aaKnown RBP13.44□□□□□ -0.26
LTBR-202ENST00000440421 RMDN2Q96LZ7 410 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 TAAR9Q96RI9 348 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 CCM2Q9BSQ5 444 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 PRORYQ9H606 182 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 SLC39A1Q9NY26 324 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 ACSL5Q9ULC5 683 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 TCAF1Q9Y4C2 921 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 CFAP47Q6ZTR5 3102 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 CELSR3Q9NYQ7 3312 aa13.44□□□□□ -0.26
LTBR-202ENST00000440421 MN1Q10571 1320 aaPredicted RBP13.43□□□□□ -0.26
LTBR-202ENST00000440421 TCRBV7S3A2A0A539 114 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 KLHL33A6NCF5 533 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 USP27XA6NNY8 438 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 CAPN5O15484 640 aaPredicted RBP13.43□□□□□ -0.26
LTBR-202ENST00000440421 KRT14P02533 472 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 C9P02748 559 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 CAPZBP47756 277 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 TMPRSS3P57727 454 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 PRAMEP78395 509 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 GPS1Q13098 491 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 PCID2Q5JVF3 399 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 ANKS6Q68DC2 871 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 IRGCQ6NXR0 463 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 AFTPHQ6ULP2 937 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 FAM92BQ6ZTR7 304 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 OR6P1Q8NGX9 317 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.43□□□□□ -0.26
LTBR-202ENST00000440421 C9orf72Q96LT7 481 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 OSBPL9Q96SU4 736 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 CTRCQ99895 268 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 COG4Q9H9E3 785 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 VPS37BQ9H9H4 285 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 CHRAC1Q9NRG0 131 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms