RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 IDH3BO43837 385 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 MPZL2O60487 215 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 DHRS4L1P0CG22 281 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 NR2F6P10588 404 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 PRKAR2AP13861 404 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 CDH15P55291 814 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 SNRPD1P62314 119 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 IRF9Q00978 393 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 DGKKQ5KSL6 1271 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 EPGNQ6UW88 154 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 C15orf39Q6ZRI6 1047 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 SLC26A9Q7LBE3 791 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 AMIGO3Q86WK7 504 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 KBTBD2Q8IY47 623 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 HM13Q8TCT9 377 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 COPS5Q92905 334 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ZYG11BQ9C0D3 744 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ROGDIQ9GZN7 287 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 LIN28AQ9H9Z2 209 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 SMURF2Q9HAU4 748 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 SDHAF3Q9NRP4 125 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ARL15Q9NXU5 204 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 IFT80Q9P2H3 777 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 PNMA8BQ9ULN7 279 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 ING4Q9UNL4 249 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ERVK-11Q9UQG0 969 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 MRPS23Q9Y3D9 190 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 PCDHB1Q9Y5F3 818 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 PKD1L3Q7Z443 1732 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 A0A0J9YYE9 177 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 MANSC4A6NHS7 340 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 B8ZZF3 427 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 XYLBO75191 536 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 RECQL4O94761 1208 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ARF4P18085 180 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 ATP5C1P36542 298 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 PTPN5P54829 565 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 LGALS3BPQ08380 585 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ZNF252P-AS1Q0IIN9 211 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 FCHO2Q0JRZ9 810 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ACAP2Q15057 778 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 QPRTQ15274 297 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 TLR1Q15399 786 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ZNF124Q15973 351 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 TEX44Q53QW1 395 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 CELF3Q5SZQ8 465 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 REP15Q6BDI9 236 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 LIN54Q6MZP7 749 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 CERS6Q6ZMG9 384 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 CATSPERGQ6ZRH7 1159 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ZNF621Q6ZSS3 439 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 PGBD3Q8N328 593 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 FANK1Q8TC84 345 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 NXPE3Q969Y0 559 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ZHX1-C8orf76Q96EF9 292 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 GMLQ99445 158 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 CCDC3Q9BQI4 270 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 NOL6Q9H6R4 1146 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 SEMA4BQ9NPR2 832 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 ZNF112Q9UJU3 913 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 CACNA1SQ13698 1873 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 MYOCOSA0A1B0GUC4 107 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 CCDC182A6NF36 153 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 MSCO60682 206 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 TULP3O75386 442 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 BPNT1O95861 308 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 IL1BP01584 269 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 ADRA1BP35368 520 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 HNMTP50135 292 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 GNG2P59768 71 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 HSPA14Q0VDF9 509 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 DGCR6Q14129 220 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 SLC9A4Q6AI14 798 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 DENND5AQ6IQ26 1287 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 KLHL17Q6TDP4 642 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 C16orf62Q7Z3J2 963 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 TMPRSS9Q7Z410 1059 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 GPR180Q86V85 440 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 MMAAQ8IVH4 418 aaKnown RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 OFCC1Q8IZS5 231 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 MINDY2Q8NBR6 621 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 OR52K2Q8NGK3 314 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 FBXO30Q8TB52 745 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 CMTM3Q96MX0 182 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 SAMD11Q96NU1 681 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 PEBP4Q96S96 227 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 ZNF607Q96SK3 696 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 MLPHQ9BV36 600 aaPredicted RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 TDRD1Q9BXT4 1180 aaKnown RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 OXSMQ9NWU1 459 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 MARCH2Q9P0N8 246 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 ST3GAL5Q9UNP4 418 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 BTRCQ9Y297 605 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 SIPA1L3O60292 1781 aaPredicted RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 ANKDD1BA6NHY2 528 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 FAM189A1O60320 539 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 IPO13O94829 963 aaKnown RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 LRIG2O94898 1065 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 ZBTB7AO95365 584 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 ASGR1P07306 291 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms