RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 MMAAQ8IVH4 418 aaKnown RBP8.46□□□□□ -1.05
HPS4-206ENST00000439453 Q8N9G6 341 aaPredicted RBP8.46□□□□□ -1.05
HPS4-206ENST00000439453 IPMKQ8NFU5 416 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 NDNFQ8TB73 568 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 SPPL3Q8TCT6 385 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 SLC2A14Q8TDB8 520 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 TWIST2Q8WVJ9 160 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 ANKRD49Q8WVL7 239 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 CAPSLQ8WWF8 208 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 VPS33AQ96AX1 596 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 DHRS1Q96LJ7 313 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 HOXD1Q9GZZ0 328 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 PIF1Q9H611 641 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 ALG9Q9H6U8 611 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 PARVBQ9HBI1 364 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 LTB4R2Q9NPC1 389 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 FAM118AQ9NWS6 357 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 STAP1Q9ULZ2 295 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 PTPRDP23468 1912 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 MYLKQ15746 1914 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 A0A1W2PP18 115 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 SLC22A1O15245 554 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 HOXA2O43364 376 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 NUAK1O60285 661 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 TBC1D4O60343 1298 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 GABARAPO95166 117 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 POMCP01189 267 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 GALTP07902 379 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 CDH1P12830 882 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 PAMP19021 973 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 AGXTP21549 392 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 PCMT1P22061 227 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 KCNC1P48547 511 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 SEMA3BQ13214 749 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 CTU2Q2VPK5 515 aaKnown RBP8.46□□□□□ -1.06
HPS4-206ENST00000439453 ADPRMQ3LIE5 342 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 INTS6LQ5JSJ4 861 aaKnown RBP8.46□□□□□ -1.06
HPS4-206ENST00000439453 ADCK1Q86TW2 530 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 PROSER1Q86XN7 944 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 FBXO22Q8NEZ5 403 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 TUBGCP3Q96CW5 907 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 TXNDC15Q96J42 360 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 SAMD11Q96NU1 681 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 NODALQ96S42 347 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 FICDQ9BVA6 458 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 PMF1-BGLAPU3KQ54 211 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 ASPDHA6ND91 283 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 MT-CYBP00156 380 aaPredicted RBP8.46□□□□□ -1.06
HPS4-206ENST00000439453 HGFP14210 728 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 HTR1EP28566 365 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 CA8P35219 290 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 CTNNB1P35222 781 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 IRS1P35568 1242 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 NKX2-5P52952 324 aaPredicted RBP8.46□□□□□ -1.06
HPS4-206ENST00000439453 CDC20Q12834 499 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 TOP3AQ13472 1001 aaPredicted RBP8.46□□□□□ -1.06
HPS4-206ENST00000439453 COL19A1Q14993 1142 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 ZBTB6Q15916 424 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 CARTPTQ16568 116 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 HIST2H2ACQ16777 129 aaPredicted RBP8.46□□□□□ -1.06
HPS4-206ENST00000439453 PAGE3Q5JUK9 113 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 TMEM236Q5W0B7 351 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 DENND5AQ6IQ26 1287 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 VASH1Q7L8A9 365 aaPredicted RBP8.46□□□□□ -1.06
HPS4-206ENST00000439453 ZNF555Q8NEP9 628 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 GLMNQ92990 594 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 NSMCE2Q96MF7 247 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 BCL7BQ9BQE9 202 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 MID1IP1Q9NPA3 183 aa8.46□□□□□ -1.06
HPS4-206ENST00000439453 AAR2Q9Y312 384 aaKnown RBP8.46□□□□□ -1.06
HPS4-206ENST00000439453 TRIOO75962 3097 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 ANKRD34BA5PLL1 514 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 PTGES3LE9PB15 166 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 I6L893 689 aaPredicted RBP8.45□□□□□ -1.06
HPS4-206ENST00000439453 PPP6CO00743 305 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 AZIN1O14977 448 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 SOAT2O75908 522 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 CDK14O94921 469 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 PRSS23O95084 383 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 HPRP00739 348 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 CES1P23141 567 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 LMO2P25791 158 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 ALDH4A1P30038 563 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 HCAR3P49019 387 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 FOXA1P55317 472 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 KCNK10P57789 538 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 OR4D2P58180 307 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 LSM3P62310 102 aaKnown RBP8.45□□□□□ -1.06
HPS4-206ENST00000439453 HERVK_113P63132 956 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 CD47Q08722 323 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 CAMK2BQ13554 666 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 KIAA2013Q8IYS2 634 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 C3orf58Q8NDZ4 430 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 TSPAN17Q96FV3 270 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 ZNF486Q96H40 463 aaPredicted RBP8.45□□□□□ -1.06
HPS4-206ENST00000439453 CYP2S1Q96SQ9 504 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 MBOAT4Q96T53 435 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 ERVK-6Q9BXR3 956 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 CCDC90BQ9GZT6 254 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 MOV10Q9HCE1 1003 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms