RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 MYEOVQ96EZ4 313 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 TSPAN17Q96FV3 270 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 SQORQ9Y6N5 450 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 STX7O15400 261 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 PQBP1O60828 265 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 KRT8P05787 483 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 RBP1P09455 135 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 HOXD11P31277 338 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 PIGAP37287 484 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 RACK1P63244 317 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZNF648Q5T619 568 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 RGMBQ6NW40 437 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 AHSA2Q719I0 299 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZDHHC13Q8IUH4 622 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZNF555Q8NEP9 628 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 OR10A6Q8NH74 314 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 SLC35B4Q969S0 331 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 CLIP3Q96DZ5 547 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 TRPV5Q9NQA5 729 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 SUCOQ9UBS9 1254 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 ANKRD6Q9Y2G4 727 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 FAM32AQ9Y421 112 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 CPQQ9Y646 472 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 BPTFQ12830 3046 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 NPEPPSL1A6NEC2 478 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 CDC7O00311 574 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 RAD51BO15315 384 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 FGF10O15520 208 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 OR1I1O60431 355 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 ALDH2P05091 517 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 GKP32189 559 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 SELPLGQ14242 412 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 C18orf21Q32NC0 220 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 MORN1Q5T089 497 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 DENND5AQ6IQ26 1287 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 PPP4R4Q6NUP7 873 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 ENPP6Q6UWR7 440 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 FBXO39Q8N4B4 442 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 DBF4BQ8NFT6 615 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 RAET1EQ8TD07 263 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 FAR1Q8WVX9 515 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 BIRC7Q96CA5 298 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 LRRC58Q96CX6 371 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 SCLYQ96I15 445 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 NSMCE3Q96MG7 304 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 GPR21Q99679 349 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 ALOXE3Q9BYJ1 711 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 GPR63Q9BZJ6 419 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 LATS2Q9NRM7 1088 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 MKS1Q9NXB0 559 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZNHIT2Q9UHR6 403 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 ERGIC3Q9Y282 383 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 PCDHGA8Q9Y5G5 932 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 NOX1Q9Y5S8 564 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 NINQ8N4C6 2090 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 NIPSNAP2O75323 286 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 CNPP09543 421 aaKnown RBP9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 HTR1BP28222 390 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 CTGFP29279 349 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 OR1D2P34982 312 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 FCGRTP55899 365 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 POU4F1Q01851 419 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 SEMA3BQ13214 749 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 MTA1Q13330 715 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 PWP1Q13610 501 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 NR6A1Q15406 480 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 NFE2Q16621 373 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 MOGQ16653 247 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 PM20D1Q6GTS8 502 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 FAM217AQ8IXS0 508 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 SLC22A15Q8IZD6 547 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 HM13Q8TCT9 377 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 RORBQ92753 470 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 SLC30A3Q99726 388 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 POLR1EQ9GZS1 481 aaKnown RBP9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 SLC25A51Q9H1U9 297 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 TP63Q9H3D4 680 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 RNF167Q9H6Y7 350 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 HMG20AQ9NP66 347 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 CATSPERZQ9NTU4 200 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 MAP10Q9P2G4 905 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 ERVK-18Q9QC07 812 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 PSME2Q9UL46 239 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 PCDHB9Q9Y5E1 797 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 PCDHB7Q9Y5E2 793 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 DNAJC15Q9Y5T4 150 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 hCG_2039718K7EN88 272 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 SNAP91O60641 907 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 DEAF1O75398 565 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZNF12P17014 697 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 IFITM3Q01628 133 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 PLD1Q13393 1074 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 GTDC1Q4AE62 458 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 CYBRD1Q53TN4 286 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 CATSPEREQ5SY80 951 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 ARMC12Q5T9G4 340 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 TPGS1Q6ZTW0 290 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 MCOLN3Q8TDD5 553 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 AUTS2Q8WXX7 1259 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 TTYH2Q9BSA4 534 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms