RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 CCM2Q9BSQ5 444 aa16.6■□□□□ 0.25
TARDBP-203ENST00000439080 FAM129AQ9BZQ8 928 aa16.6■□□□□ 0.25
TARDBP-203ENST00000439080 P2RY12Q9H244 342 aa16.6■□□□□ 0.25
TARDBP-203ENST00000439080 COG4Q9H9E3 785 aa16.6■□□□□ 0.25
TARDBP-203ENST00000439080 IARS2Q9NSE4 1012 aaKnown RBP16.6■□□□□ 0.25
TARDBP-203ENST00000439080 INTS10Q9NVR2 710 aaKnown RBP16.6■□□□□ 0.25
TARDBP-203ENST00000439080 GNPTGQ9UJJ9 305 aa16.6■□□□□ 0.25
TARDBP-203ENST00000439080 APOBEC2Q9Y235 224 aaKnown RBP16.6■□□□□ 0.25
TARDBP-203ENST00000439080 F8W8V4 182 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 DKK1O94907 266 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 GSTM1P09488 218 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 RHOXF2BP0C7M4 288 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 BRAFP15056 766 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 RPS3P23396 243 aaKnown RBP eCLIP16.59■□□□□ 0.253e-8■□□□□ 11
TARDBP-203ENST00000439080 MPP1Q00013 466 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 GSTM4Q03013 218 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 CTBP1Q13363 440 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 ILKQ13418 452 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 ZNF658BQ4V348 819 aaPredicted RBP16.59■□□□□ 0.25
TARDBP-203ENST00000439080 PERM1Q5SV97 790 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 AGAP9Q5VTM2 703 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 TRMT10BQ6PF06 316 aaKnown RBP16.59■□□□□ 0.25
TARDBP-203ENST00000439080 CAPN12Q6ZSI9 719 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 LRRC6Q86X45 466 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 ARL14Q8N4G2 192 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 LILRA3Q8N6C8 439 aaPredicted RBP16.59■□□□□ 0.25
TARDBP-203ENST00000439080 GSDMBQ8TAX9 411 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 LKAAEAR1Q8TD35 194 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 PYROXD1Q8WU10 500 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 IFT81Q8WYA0 676 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 RHOXF2Q9BQY4 288 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 FOXP3Q9BZS1 431 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 PPANQ9NQ55 473 aaKnown RBP16.59■□□□□ 0.25
TARDBP-203ENST00000439080 FBXO6Q9NRD1 293 aaPredicted RBP16.59■□□□□ 0.25
TARDBP-203ENST00000439080 SCHIP1Q9P0W5 487 aaPredicted RBP16.59■□□□□ 0.25
TARDBP-203ENST00000439080 SLC17A6Q9P2U8 582 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 VPS9D1Q9Y2B5 631 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 WDR37Q9Y2I8 494 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 PCDHGA1Q9Y5H4 931 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 RNF215Q9Y6U7 377 aa16.59■□□□□ 0.25
TARDBP-203ENST00000439080 TRBV23OR9-2A0A075B6M9 112 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 C17orf113A0A1B0GUU1 675 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 NUDT21O43809 227 aaKnown RBP16.58■□□□□ 0.24
TARDBP-203ENST00000439080 GP1BAP07359 652 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 GLB1P16278 677 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 ITGB6P18564 788 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 ECHS1P30084 290 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 HALP42357 657 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 FASLGP48023 281 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 BIRC2Q13490 618 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 BOP1Q14137 746 aaKnown RBP16.58■□□□□ 0.24
TARDBP-203ENST00000439080 FRG1Q14331 258 aaKnown RBP16.58■□□□□ 0.24
TARDBP-203ENST00000439080 SYTL3Q4VX76 610 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 ZNF789Q5FWF6 425 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 CTSL3PQ5NE16 218 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 METRNLQ641Q3 311 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 PTRHD1Q6GMV3 140 aaKnown RBP16.58■□□□□ 0.24
TARDBP-203ENST00000439080 IYDQ6PHW0 289 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 WASH2PQ6VEQ5 465 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 CNTN4Q8IWV2 1026 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 CFAP206Q8IYR0 622 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 OR6C4Q8NGE1 309 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 GABPB2Q8TAK5 448 aaPredicted RBP16.58■□□□□ 0.24
TARDBP-203ENST00000439080 ELMO1Q92556 727 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 CCDC3Q9BQI4 270 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 TSSK1BQ9BXA7 367 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 WASH6PQ9NQA3 447 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 MTRF1LQ9UGC7 380 aaKnown RBP16.58■□□□□ 0.24
TARDBP-203ENST00000439080 RABGEF1Q9UJ41 708 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 PSMD13Q9UNM6 376 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 CRYL1Q9Y2S2 319 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 PCDHB1Q9Y5F3 818 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 SPTBN2O15020 2390 aa16.58■□□□□ 0.24
TARDBP-203ENST00000439080 KIR2DS5A0A0G2JLQ3 304 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 A0A0G2JNG1 304 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 OR5K4A6NMS3 321 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 OR52A4PA6NMU1 304 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 IQCF5A8MTL0 148 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 KIR2DS3K7RE56 304 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 S1PR4O95977 384 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 SLC35G4P0C7Q5 338 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 PREPP48147 710 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 ADARP55265 1226 aaKnown RBP16.57■□□□□ 0.24
TARDBP-203ENST00000439080 HHEXQ03014 270 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 KIR2DS5Q14953 304 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 CLCA4Q14CN2 919 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 TEX35Q5T0J7 233 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 N4BP2L1Q5TBK1 243 aaPredicted RBP16.57■□□□□ 0.24
TARDBP-203ENST00000439080 ABRAXAS1Q6UWZ7 409 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 KRT222Q8N1A0 295 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 C2CD4AQ8NCU7 369 aaPredicted RBP16.57■□□□□ 0.24
TARDBP-203ENST00000439080 C9orf72Q96LT7 481 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 RMDN2Q96LZ7 410 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 BIRC8Q96P09 236 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 FMO2Q99518 471 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 WWP1Q9H0M0 922 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 STN1Q9H668 368 aaKnown RBP16.57■□□□□ 0.24
TARDBP-203ENST00000439080 LRIT1Q9P2V4 623 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 FBXO5Q9UKT4 447 aa16.57■□□□□ 0.24
TARDBP-203ENST00000439080 ACSL5Q9ULC5 683 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms