RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SDK2Q58EX2 2172 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 SSU72P8A0A1W2PR75 194 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 PIPSLA2A3N6 862 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 OR52A4PA6NMU1 304 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 CHUKO15111 745 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 MTX2O75431 263 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 RFPL1O75677 317 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 KIAA0754O94854 1291 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 NDUFA10O95299 355 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 C9P02748 559 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 BPIP17213 487 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 PTMSP20962 102 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 OAS2P29728 719 aaKnown RBP7.62□□□□□ -1.19
VPS50-204ENST00000438395 AKT1P31749 480 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 HNRNPH3P31942 346 aaKnown RBP7.62□□□□□ -1.19
VPS50-204ENST00000438395 ARHGAP25P42331 645 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 SLC1A1P43005 524 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 DRG2P55039 364 aaKnown RBP7.62□□□□□ -1.19
VPS50-204ENST00000438395 PDE1BQ01064 536 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 XRCC4Q13426 336 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 TUBB3Q13509 450 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 GPR18Q14330 331 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 KRT33BQ14525 404 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 IHHQ14623 411 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 LONRF2Q1L5Z9 754 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 LDLRAP1Q5SW96 308 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 LRRC38Q5VT99 294 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 AGAP9Q5VTM2 703 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 SLC9A4Q6AI14 798 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 TIPARPQ7Z3E1 657 aaKnown RBP7.62□□□□□ -1.19
VPS50-204ENST00000438395 PRSS42Q7Z5A4 293 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 AMZ2Q86W34 360 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 ATCAYQ86WG3 371 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 PPP1R3BQ86XI6 285 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 CCDC50Q8IVM0 306 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 SIDT2Q8NBJ9 832 aaKnown RBP7.62□□□□□ -1.19
VPS50-204ENST00000438395 SLC35G2Q8TBE7 412 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 BRSK1Q8TDC3 778 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 TFB1MQ8WVM0 346 aaKnown RBP7.62□□□□□ -1.19
VPS50-204ENST00000438395 SEC14L1Q92503 715 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 RSC1A1Q92681 617 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 RNF31Q96EP0 1072 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 TRIB3Q96RU7 358 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 TWSG1Q9GZX9 223 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 EPN3Q9H201 632 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 ZNF768Q9H5H4 540 aaKnown RBP7.62□□□□□ -1.19
VPS50-204ENST00000438395 BPIFA1Q9NP55 256 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 SIDT1Q9NXL6 827 aaKnown RBP7.62□□□□□ -1.19
VPS50-204ENST00000438395 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.62□□□□□ -1.19
VPS50-204ENST00000438395 HACD3Q9P035 362 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 FAM153AQ9UHL3 310 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 CROTQ9UKG9 612 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 MAN2B2Q9Y2E5 1009 aa7.62□□□□□ -1.19
VPS50-204ENST00000438395 PCYT1BQ9Y5K3 369 aaPredicted RBP7.62□□□□□ -1.19
VPS50-204ENST00000438395 USP9YO00507 2555 aaPredicted RBP7.62□□□□□ -1.19
VPS50-204ENST00000438395 SCN8AQ9UQD0 1980 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 GLYATL1P3A0A0U1RQE8 302 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 UBA6A0AVT1 1052 aaPredicted RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 MACROD2A1Z1Q3 448 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 PRR19A6NJB7 356 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 C21orf140B9A014 251 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 F5H423 210 aaPredicted RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 KCNJ13O60928 360 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 STK10O94804 968 aaKnown RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 DLGAP3O95886 979 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 MT-CYBP00156 380 aaPredicted RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 SLC35G4P0C7Q5 338 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 CD33P20138 364 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 MSH3P20585 1137 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 PBLDP30039 288 aaPredicted RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 SPAM1P38567 509 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 LEPRP48357 1165 aaKnown RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 NR2C2P49116 596 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 WNT3AP56704 352 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 ACY1Q03154 408 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 KLRB1Q12918 225 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 ITGA9Q13797 1035 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 ERV3-1Q14264 604 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS50-204ENST00000438395 CRTC2Q53ET0 693 aaPredicted RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 TEX44Q53QW1 395 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 DNTTIP2Q5QJE6 756 aaKnown RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 ATP1A1-AS1Q5TC04 95 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 KAZNQ674X7 775 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 ABRAXAS1Q6UWZ7 409 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 NPNTQ6UXI9 565 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 FAM151BQ6UXP7 276 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 WASH2PQ6VEQ5 465 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 FAM92BQ6ZTR7 304 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 GLT6D1Q7Z4J2 308 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 TMC3Q7Z5M5 1100 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 TTC30BQ8N4P2 665 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 SLC25A41Q8N5S1 370 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 TEX19Q8NA77 164 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 IPMKQ8NFU5 416 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 SPATA22Q8NHS9 363 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 BLOC1S5Q8TDH9 187 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 UBXN4Q92575 508 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 P3H4Q92791 437 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 LRRC45Q96CN5 670 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms