RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ANKRD46Q86W74 232 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 EGFL6Q8IUX8 553 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ZBTB2Q8N680 514 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 PROX1Q92786 737 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 HPS1Q92902 700 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 KLHL32Q96NJ5 620 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF599Q96NL3 588 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 OLFM1Q99784 485 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 C1orf109Q9NX04 203 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 EHD3Q9NZN3 535 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 PCDHGA7Q9Y5G6 932 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ZFP37Q9Y6Q3 630 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 GLYATL1P3A0A0U1RQE8 302 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 HMX2A2RU54 273 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 HNRNPCL2B2RXH8 293 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 NT5C1B-RDH14C9J2C7 533 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 J3QRK9 145 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ENPP3O14638 875 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 FFAR2O15552 330 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 LZTS3O60299 673 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 CNTN5O94779 1100 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 EPOP01588 193 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 GSTM1P09488 218 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 PRPS2P11908 318 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ITGA2P17301 1181 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 VARSP26640 1264 aaKnown RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 PPP2R1BP30154 601 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ACVRL1P37023 503 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ALDH9A1P49189 494 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 RPIAP49247 311 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ALDH3A2P51648 485 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 C1QTNF8P60827 252 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 GRB7Q14451 532 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 PTPRCAPQ14761 206 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 TYW3Q6IPR3 259 aaKnown RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ELMSAN1Q6PJG2 1045 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF773Q6PK81 442 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 SERPINA9Q86WD7 417 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 MINDY1Q8N5J2 469 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 FBXL8Q96CD0 374 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 IMP4Q96G21 291 aaKnown RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ABHD8Q96I13 439 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 SUSD3Q96L08 255 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 B3GALT6Q96L58 329 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 VPS35Q96QK1 796 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 WDR6Q9NNW5 1121 aaKnown RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 POLR3BQ9NW08 1133 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 CRNNQ9UBG3 495 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 TRPC4Q9UBN4 977 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 GTF2IRD1Q9UHL9 959 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 KLHL20Q9Y2M5 609 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 LAMB2P55268 1798 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 LTBP3Q9NS15 1303 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF99A8MXY4 864 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 CITO14578 2027 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TOR1BO14657 336 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 S1PR4O95977 384 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 SERPINA1P01009 418 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 ENO2P09104 434 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 C7P10643 843 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 OR1D2P34982 312 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 ARSFP54793 590 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 RPS14P62263 151 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 CYP4F2P78329 520 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 PURAQ00577 322 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 MYBPC1Q00872 1141 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 PPP1R8Q12972 351 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 SKIV2LQ15477 1246 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 MOGQ16653 247 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 PDZK1Q5T2W1 519 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 AHSA2Q719I0 299 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TRMT11Q7Z4G4 463 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TRIM74Q86UV6 250 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TRIM73Q86UV7 250 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 NRAPQ86VF7 1730 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 FIBCD1Q8N539 461 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 GOLM1Q8NBJ4 401 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 PHF10Q8WUB8 498 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 KCNN1Q92952 543 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 FEM1AQ9BSK4 669 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 RAPGEFL1Q9UHV5 662 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 RIMS3Q9UJD0 308 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 A0A1B0GVG6 124 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 STX16O14662 325 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 MYL12BO14950 172 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 SYN3O14994 580 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 SNPHO15079 494 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 PRKD3O94806 890 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 NPPAP01160 153 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 FABP3P05413 133 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TFAP2AP05549 437 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 CYP2A6P11509 494 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 BMP2P12643 396 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 CD1DP15813 335 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 PCSK2P16519 638 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 AQP1P29972 269 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 ALDH4A1P30038 563 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 FKBP1BP68106 108 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 CDKL1Q00532 357 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms