RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 TTC30BQ8N4P2 665 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 SLC25A41Q8N5S1 370 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 TEX19Q8NA77 164 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 IPMKQ8NFU5 416 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 SPATA22Q8NHS9 363 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 BLOC1S5Q8TDH9 187 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 UBXN4Q92575 508 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 P3H4Q92791 437 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 LRRC45Q96CN5 670 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 ZNF514Q96K75 400 aaPredicted RBP7.61□□□□□ -1.19
VPS50-203ENST00000436177 OLFM3Q96PB7 478 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 VPS35Q96QK1 796 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 CD180Q99467 661 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 DNAJC7Q99615 494 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 SLC40A1Q9NP59 571 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 LUC7LQ9NQ29 371 aaKnown RBP7.61□□□□□ -1.19
VPS50-203ENST00000436177 WASH6PQ9NQA3 447 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 SPTLC3Q9NUV7 552 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 IMP3Q9NV31 184 aaKnown RBP7.61□□□□□ -1.19
VPS50-203ENST00000436177 SOHLH2Q9NX45 425 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 UBP1Q9NZI7 540 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 SCHIP1Q9P0W5 487 aaPredicted RBP7.61□□□□□ -1.19
VPS50-203ENST00000436177 ZNF624Q9P2J8 865 aaPredicted RBP7.61□□□□□ -1.19
VPS50-203ENST00000436177 FAM8A1Q9UBU6 413 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 SLC23A2Q9UGH3 650 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 RARRES3Q9UL19 164 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 PADI1Q9ULC6 663 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 NENFQ9UMX5 172 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 G3BP2Q9UN86 482 aaKnown RBP7.61□□□□□ -1.19
VPS50-203ENST00000436177 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS50-203ENST00000436177 SLC30A1Q9Y6M5 507 aa7.61□□□□□ -1.19
VPS50-203ENST00000436177 KLHL33A6NCF5 533 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 TLCD2A6NGC4 264 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 C2orf81A6NN90 581 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 STX7O15400 261 aaKnown RBP7.6□□□□□ -1.19
VPS50-203ENST00000436177 PSTPIP1O43586 416 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 KIF1CO43896 1103 aaKnown RBP7.6□□□□□ -1.19
VPS50-203ENST00000436177 CST8O60676 142 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 VSIG8P0DPA2 414 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 NELFEP18615 380 aaKnown RBP7.6□□□□□ -1.19
VPS50-203ENST00000436177 NFKB1P19838 968 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 HLA-DPA1P20036 260 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 PTPN3P26045 913 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 HMGCLP35914 325 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 PMS2P54278 862 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 RPS15P62841 145 aaKnown RBP7.6□□□□□ -1.19
VPS50-203ENST00000436177 TMEM115Q12893 351 aaPredicted RBP7.6□□□□□ -1.19
VPS50-203ENST00000436177 PRKAA1Q13131 559 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 DNASE1L3Q13609 305 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 PRKD1Q15139 912 aaPredicted RBP7.6□□□□□ -1.19
VPS50-203ENST00000436177 ATP13A5Q4VNC0 1218 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 FNBP1LQ5T0N5 605 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 TMTC4Q5T4D3 741 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 ITPRIPL1Q6GPH6 555 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 ASB18Q6ZVZ8 466 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 B4GALNT4Q76KP1 1039 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 OOSP2Q86WS3 158 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 TMEM126BQ8IUX1 230 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 LINC00528Q8N1L1 170 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 BEND7Q8N7W2 519 aaPredicted RBP7.6□□□□□ -1.19
VPS50-203ENST00000436177 EID2BQ96D98 161 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 DCUN1D1Q96GG9 259 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 TEKT5Q96M29 485 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 VAT1Q99536 393 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 SPRY4Q9C004 299 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 FANCEQ9HB96 536 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 IL26Q9NPH9 171 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 OGFRQ9NZT2 677 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 EPHA6Q9UF33 1036 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 RSPH14Q9UHP6 348 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 PSMD13Q9UNM6 376 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 TP53TG5Q9Y2B4 290 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 SPO11Q9Y5K1 396 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 MRPS18BQ9Y676 258 aaKnown RBP7.6□□□□□ -1.19
VPS50-203ENST00000436177 KCNMB2Q9Y691 235 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 DOPEY2Q9Y3R5 2298 aa7.6□□□□□ -1.19
VPS50-203ENST00000436177 USP9XQ93008 2570 aaPredicted RBP7.6□□□□□ -1.19
VPS50-203ENST00000436177 C3orf70A6NLC5 250 aaPredicted RBP7.59□□□□□ -1.19
VPS50-203ENST00000436177 OR2AG2A6NM03 316 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 H7C0C1 242 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 MFAP3LO75121 409 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 CPNE3O75131 537 aaKnown RBP7.59□□□□□ -1.19
VPS50-203ENST00000436177 SPAG6O75602 509 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 CREG1O75629 220 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 POP7O75817 140 aaKnown RBP7.59□□□□□ -1.19
VPS50-203ENST00000436177 ANXA9O76027 345 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 PRAMEF1O95521 474 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 EPOP01588 193 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 NTRK1P04629 796 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 PTMAP06454 111 aaKnown RBP7.59□□□□□ -1.19
VPS50-203ENST00000436177 PYGMP11217 842 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 RALBP11234 206 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 MTHFD1P11586 935 aaKnown RBP7.59□□□□□ -1.19
VPS50-203ENST00000436177 FGF5P12034 268 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 BRAFP15056 766 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 ZNF28P17035 718 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 COMTP21964 271 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 CTNNA2P26232 953 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 CDKN2BP42772 138 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 ATP5OP48047 213 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms