RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.09□□□□□ -1.43
VRK2-206ENST00000435505 FIG4Q92562 907 aa6.09□□□□□ -1.43
VRK2-206ENST00000435505 PDLIM5Q96HC4 596 aaKnown RBP6.09□□□□□ -1.43
VRK2-206ENST00000435505 NACC1Q96RE7 527 aa6.09□□□□□ -1.43
VRK2-206ENST00000435505 IL12RB2Q99665 862 aa6.09□□□□□ -1.43
VRK2-206ENST00000435505 AIFM2Q9BRQ8 373 aa6.09□□□□□ -1.43
VRK2-206ENST00000435505 OSBPL11Q9BXB4 747 aa6.09□□□□□ -1.43
VRK2-206ENST00000435505 AMNQ9BXJ7 453 aa6.09□□□□□ -1.43
VRK2-206ENST00000435505 REXO4Q9GZR2 422 aaKnown RBP6.09□□□□□ -1.43
VRK2-206ENST00000435505 NANOGQ9H9S0 305 aa6.09□□□□□ -1.43
VRK2-206ENST00000435505 NDUFAF4Q9P032 175 aa6.09□□□□□ -1.43
VRK2-206ENST00000435505 SLC24A2Q9UI40 661 aa6.09□□□□□ -1.43
VRK2-206ENST00000435505 COA3Q9Y2R0 106 aaPredicted RBP6.09□□□□□ -1.43
VRK2-206ENST00000435505 SIT1Q9Y3P8 196 aa6.09□□□□□ -1.43
VRK2-206ENST00000435505 UGT2A1Q9Y4X1 527 aa6.09□□□□□ -1.43
VRK2-206ENST00000435505 AP4S1Q9Y587 144 aa6.09□□□□□ -1.43
VRK2-206ENST00000435505 MAU2Q9Y6X3 613 aa6.09□□□□□ -1.43
VRK2-206ENST00000435505 PRSS51A0A1B0GVH4 220 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 SDR42E2A6NKP2 422 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 I3L4J1 428 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 hCG_2039718K7EN88 272 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 ARHGEF15O94989 841 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 GH2P01242 217 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 NFICP08651 508 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 CCDC159P0C7I6 412 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 KRT5P13647 590 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 NMT1P30419 496 aaKnown RBP6.08□□□□□ -1.44
VRK2-206ENST00000435505 PTGS2P35354 604 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 ATXN3P54252 364 aaPredicted RBP6.08□□□□□ -1.44
VRK2-206ENST00000435505 HADHBP55084 474 aaKnown RBP6.08□□□□□ -1.44
VRK2-206ENST00000435505 DSTNP60981 165 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 ROM1Q03395 351 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 CD69Q07108 199 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 BST1Q10588 318 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 TROAPQ12815 778 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 TMEM115Q12893 351 aaPredicted RBP6.08□□□□□ -1.44
VRK2-206ENST00000435505 MAPK11Q15759 364 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 KLHL38Q2WGJ6 581 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 SLC39A12Q504Y0 691 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 TEX44Q53QW1 395 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 PLAG1Q6DJT9 500 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 NEK5Q6P3R8 708 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 TUBA3EQ6PEY2 450 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 FAM111BQ6SJ93 734 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 PET117Q6UWS5 81 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 CHST9Q7L1S5 443 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 RASGRP3Q8IV61 690 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 ZC3H3Q8IXZ2 948 aaKnown RBP6.08□□□□□ -1.44
VRK2-206ENST00000435505 C10orf53Q8N6V4 93 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 ASCC1Q8N9N2 400 aaKnown RBP6.08□□□□□ -1.44
VRK2-206ENST00000435505 FAM47BQ8NA70 645 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 TNIP2Q8NFZ5 429 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 SLC20A1Q8WUM9 679 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 TFB1MQ8WVM0 346 aaKnown RBP6.08□□□□□ -1.44
VRK2-206ENST00000435505 SPSB4Q96A44 273 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 TXNDC15Q96J42 360 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 PAFAH2Q99487 392 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 UQCC2Q9BRT2 126 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 NYXQ9GZU5 481 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 ACSS3Q9H6R3 686 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 TMEM206Q9H813 350 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 RMND5AQ9H871 391 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 SLC38A10Q9HBR0 1119 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 MRPS18AQ9NVS2 196 aaKnown RBP6.08□□□□□ -1.44
VRK2-206ENST00000435505 ZSCAN32Q9NX65 697 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 SLCO3A1Q9UIG8 710 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 ITGA11Q9UKX5 1188 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 SLC8A2Q9UPR5 921 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 NUP188Q5SRE5 1749 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 ASTN2O75129 1339 aaPredicted RBP6.08□□□□□ -1.44
VRK2-206ENST00000435505 ATRNL1Q5VV63 1379 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 ADAMTSL3P82987 1691 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 A0A087WXM4 84 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 ZNF839A8K0R7 811 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 IFNL4K9M1U5 179 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 VEGFDO43915 354 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 NTRK1P04629 796 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 MCF2P10911 925 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 SRFP11831 508 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 ZNF26P17031 533 aaPredicted RBP6.08□□□□□ -1.44
VRK2-206ENST00000435505 LAG3P18627 525 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 IL32P24001 234 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 CALML3P27482 149 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 ADSSP30520 456 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 CASP3P42574 277 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 TUBB3Q13509 450 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 CAMK1Q14012 370 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 CHRNA2Q15822 529 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 INSCQ1MX18 579 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 TRIM60Q495X7 471 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 RAB41Q5JT25 222 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.08□□□□□ -1.44
VRK2-206ENST00000435505 LCE2DQ5TA82 110 aaPredicted RBP6.08□□□□□ -1.44
VRK2-206ENST00000435505 FDX2Q6P4F2 183 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 ARHGAP11AQ6P4F7 1023 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 PLEKHG7Q6ZR37 379 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 TMEM126BQ8IUX1 230 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 LCORLQ8N3X6 602 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 POC5Q8NA72 575 aa6.08□□□□□ -1.44
VRK2-206ENST00000435505 LINC00116Q8NCU8 138 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms