RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 J3KRW8 73 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 PLOD2O00469 737 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 NR5A2O00482 541 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 SRPRAP08240 638 aaKnown RBP3.08□□□□□ -1.92
CLK1-204ENST00000432425 CD48P09326 243 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 LIFP15018 202 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 CKMT2P17540 419 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 TSPAN7P41732 249 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 TAF6P49848 677 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 SPOCK1Q08629 439 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 ITGA9Q13797 1035 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 ZNF497Q6ZNH5 498 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 MFSD6Q6ZSS7 791 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 NOTCH2NLQ7Z3S9 236 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 GALNT5Q7Z7M9 940 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 KRTAP7-1Q8IUC3 87 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 TICAM1Q8IUC6 712 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 GALNT13Q8IUC8 556 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 CEP97Q8IW35 865 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 NGEFQ8N5V2 710 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 OR2T12Q8NG77 320 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 CMTM3Q96MX0 182 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 DENND2DQ9H6A0 471 aaPredicted RBP3.08□□□□□ -1.92
CLK1-204ENST00000432425 OLA1Q9NTK5 396 aaKnown RBP3.08□□□□□ -1.92
CLK1-204ENST00000432425 C2orf42Q9NWW7 574 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 MIOSQ9NXC5 875 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 AASSQ9UDR5 926 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 TSPYL4Q9UJ04 414 aa3.08□□□□□ -1.92
CLK1-204ENST00000432425 CORO1CQ9ULV4 474 aaPredicted RBP3.08□□□□□ -1.92
CLK1-204ENST00000432425 TDRD9Q8NDG6 1382 aaKnown RBP3.07□□□□□ -1.92
CLK1-204ENST00000432425 STK36Q9NRP7 1315 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 MYO1GB0I1T2 1018 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 WDHD1O75717 1129 aaPredicted RBP3.07□□□□□ -1.92
CLK1-204ENST00000432425 H1F0P07305 194 aaKnown RBP3.07□□□□□ -1.92
CLK1-204ENST00000432425 MAN1A1P33908 653 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 KRTAP10-12P60413 245 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 MPP1Q00013 466 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 GAGE2BQ13066 116 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 IKQ13123 557 aaPredicted RBP3.07□□□□□ -1.92
CLK1-204ENST00000432425 CRYMQ14894 314 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 ZFP69Q49AA0 526 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 GAGE2EQ4V326 116 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 CCDC184Q52MB2 194 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 RARS2Q5T160 578 aaKnown RBP3.07□□□□□ -1.92
CLK1-204ENST00000432425 ALS2CLQ60I27 953 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 TMEM198Q66K66 360 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 JADE1Q6IE81 842 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 CCDC70Q6NSX1 233 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 GAGE2AQ6NT46 116 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 KLHL35Q6PF15 583 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 ARID3BQ8IVW6 561 aaPredicted RBP3.07□□□□□ -1.92
CLK1-204ENST00000432425 GPALPP1Q8IXQ4 340 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 ART5Q96L15 291 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 OR2A14Q96R47 310 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 DDOQ99489 341 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 C1QTNF1Q9BXJ1 281 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 PLK3Q9H4B4 646 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 OLFML3Q9NRN5 406 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 GAGE2DQ9UEU5 116 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 MMP24Q9Y5R2 645 aa3.07□□□□□ -1.92
CLK1-204ENST00000432425 ERI2A8K979 691 aaKnown RBP3.06□□□□□ -1.92
CLK1-204ENST00000432425 MAGEB17A8MXT2 336 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 A8MZ25 164 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 CSPG5O95196 566 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 GCNT3O95395 438 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 LAMP2P13473 410 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 RARGP13631 454 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 SELLP14151 372 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 ITGA3P26006 1051 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 PSMC4P43686 418 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 CAMPP49913 170 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 RPS18P62269 152 aaKnown RBP3.06□□□□□ -1.92
CLK1-204ENST00000432425 KRT32Q14532 448 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 ASTE1Q2TB18 679 aaPredicted RBP3.06□□□□□ -1.92
CLK1-204ENST00000432425 FFAR4Q5NUL3 377 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 KLC3Q6P597 504 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 CFAP77Q6ZQR2 320 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 DENND5BQ6ZUT9 1274 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 IKBIPQ70UQ0 350 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 ISCA2Q86U28 154 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 MYPOPQ86VE0 399 aaPredicted RBP3.06□□□□□ -1.92
CLK1-204ENST00000432425 PLD3Q8IV08 490 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 DDHD1Q8NEL9 900 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 TAF15Q92804 592 aaKnown RBP eCLIP3.06□□□□□ -1.92
CLK1-204ENST00000432425 TMEM143Q96AN5 459 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 HGH1Q9BTY7 390 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 DNAJC18Q9H819 358 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 SIX2Q9NPC8 291 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 KRT84Q9NSB2 600 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 COQ3Q9NZJ6 369 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 DNAJB4Q9UDY4 337 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 NRBP1Q9UHY1 535 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 NENFQ9UMX5 172 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 MRPS28Q9Y2Q9 187 aaKnown RBP3.06□□□□□ -1.92
CLK1-204ENST00000432425 CMAHPQ9Y471 501 aa3.06□□□□□ -1.92
CLK1-204ENST00000432425 TEX13DA0A0J9YY54 714 aaPredicted RBP3.05□□□□□ -1.92
CLK1-204ENST00000432425 SH2B2O14492 632 aaPredicted RBP3.05□□□□□ -1.92
CLK1-204ENST00000432425 SLC22A2O15244 555 aa3.05□□□□□ -1.92
CLK1-204ENST00000432425 SCGB1D1O95968 90 aa3.05□□□□□ -1.92
CLK1-204ENST00000432425 CLPTM1O96005 669 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms