RNA–Protein interactions for RNA: ENST00000430142.5

TOP3B-204, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-204ENST00000430142 VPS4AQ9UN37 437 aa14.7□□□□□ -0.06
TOP3B-204ENST00000430142 CFAP20Q9Y6A4 193 aaKnown RBP14.7□□□□□ -0.06
TOP3B-204ENST00000430142 UBA6A0AVT1 1052 aaPredicted RBP14.69□□□□□ -0.06
TOP3B-204ENST00000430142 OR5K3A6NET4 321 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 ARGFXA6NJG6 315 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 AKR1B15C9JRZ8 316 aaPredicted RBP14.69□□□□□ -0.06
TOP3B-204ENST00000430142 F5H423 210 aaPredicted RBP14.69□□□□□ -0.06
TOP3B-204ENST00000430142 BUD23O43709 281 aaKnown RBP14.69□□□□□ -0.06
TOP3B-204ENST00000430142 TPM1P09493 284 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 TNNT1P13805 278 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 NFKB1P19838 968 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 PBLDP30039 288 aaPredicted RBP14.69□□□□□ -0.06
TOP3B-204ENST00000430142 SPAM1P38567 509 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 CHRNA4P43681 627 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 CCL11P51671 97 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 RPS15P62841 145 aaKnown RBP14.69□□□□□ -0.06
TOP3B-204ENST00000430142 HSD11B2P80365 405 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 WASHC5Q12768 1159 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 IL10RAQ13651 578 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 LAMB3Q13751 1172 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 PRKD1Q15139 912 aaPredicted RBP14.69□□□□□ -0.06
TOP3B-204ENST00000430142 GPR19Q15760 415 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 PPP2R5EQ16537 467 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 NADK2Q4G0N4 442 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 LDLRAP1Q5SW96 308 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 GPRC6AQ5T6X5 926 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 LRRC38Q5VT99 294 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 CAPRIN2Q6IMN6 1127 aaKnown RBP14.69□□□□□ -0.06
TOP3B-204ENST00000430142 SYVN1Q86TM6 617 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 KMT5CQ86Y97 462 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 CNGA4Q8IV77 575 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 RHOT2Q8IXI1 618 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 D2HGDHQ8N465 521 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 EFCAB3Q8N7B9 438 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 BEND7Q8N7W2 519 aaPredicted RBP14.69□□□□□ -0.06
TOP3B-204ENST00000430142 CPT1CQ8TCG5 803 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 DTX3LQ8TDB6 740 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 SEC14L1Q92503 715 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 INSM2Q96T92 566 aaPredicted RBP14.69□□□□□ -0.06
TOP3B-204ENST00000430142 SLC25A23Q9BV35 468 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 TRABDQ9H4I3 376 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 IMP3Q9NV31 184 aaKnown RBP14.69□□□□□ -0.06
TOP3B-204ENST00000430142 INTUQ9ULD6 942 aa14.69□□□□□ -0.06
TOP3B-204ENST00000430142 FARSAQ9Y285 508 aaKnown RBP14.69□□□□□ -0.06
TOP3B-204ENST00000430142 DNMT3AQ9Y6K1 912 aaPredicted RBP14.69□□□□□ -0.06
TOP3B-204ENST00000430142 GLYATL1P3A0A0U1RQE8 302 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 TLCD2A6NGC4 264 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 SCRG1O75711 98 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 MTHFD1P11586 935 aaKnown RBP14.68□□□□□ -0.06
TOP3B-204ENST00000430142 PGDP52209 483 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 TUBB4BP68371 445 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 PDE1BQ01064 536 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 XRCC4Q13426 336 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 TUBB2AQ13885 445 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 PTPRCAPQ14761 206 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 LLGL1Q15334 1064 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 TAZQ16635 292 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 ODF2Q5BJF6 829 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 FNBP1LQ5T0N5 605 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 ZDHHC20Q5W0Z9 365 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 METRNLQ641Q3 311 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 DUS1LQ6P1R4 473 aaKnown RBP14.68□□□□□ -0.06
TOP3B-204ENST00000430142 MFSD7Q6UXD7 560 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 SLC38A9Q8NBW4 561 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 GALNT11Q8NCW6 608 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 DDHD1Q8NEL9 900 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 BLOC1S5Q8TDH9 187 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 NAT14Q8WUY8 206 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 TFB1MQ8WVM0 346 aaKnown RBP14.68□□□□□ -0.06
TOP3B-204ENST00000430142 MR1Q95460 341 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 ZNF501Q96CX3 271 aaPredicted RBP14.68□□□□□ -0.06
TOP3B-204ENST00000430142 MRGPRX2Q96LB1 330 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 CD180Q99467 661 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 TUBB2BQ9BVA1 445 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 ZCCHC2Q9C0B9 1178 aaKnown RBP14.68□□□□□ -0.06
TOP3B-204ENST00000430142 WWP1Q9H0M0 922 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 ING2Q9H160 280 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 KCND1Q9NSA2 647 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.68□□□□□ -0.06
TOP3B-204ENST00000430142 HYOU1Q9Y4L1 999 aa14.68□□□□□ -0.06
TOP3B-204ENST00000430142 TNRC6AQ8NDV7 1962 aaKnown RBP14.67□□□□□ -0.06
TOP3B-204ENST00000430142 TEX15Q9BXT5 2789 aa14.67□□□□□ -0.06
TOP3B-204ENST00000430142 OR6C74A6NCV1 312 aa14.67□□□□□ -0.06
TOP3B-204ENST00000430142 GAPDHSO14556 408 aaPredicted RBP14.67□□□□□ -0.06
TOP3B-204ENST00000430142 CPNE3O75131 537 aaKnown RBP14.67□□□□□ -0.06
TOP3B-204ENST00000430142 AGFG2O95081 481 aa14.67□□□□□ -0.06
TOP3B-204ENST00000430142 LCA5LO95447 670 aa14.67□□□□□ -0.06
TOP3B-204ENST00000430142 EPOP01588 193 aa14.67□□□□□ -0.06
TOP3B-204ENST00000430142 PECAM1P16284 738 aaPredicted RBP14.67□□□□□ -0.06
TOP3B-204ENST00000430142 ARCN1P48444 511 aaKnown RBP14.67□□□□□ -0.06
TOP3B-204ENST00000430142 NR2C2P49116 596 aa14.67□□□□□ -0.06
TOP3B-204ENST00000430142 GPS2Q13227 327 aa14.67□□□□□ -0.06
TOP3B-204ENST00000430142 SLC1A5Q15758 541 aa14.67□□□□□ -0.06
TOP3B-204ENST00000430142 FHL5Q5TD97 284 aa14.67□□□□□ -0.06
TOP3B-204ENST00000430142 FBXO38Q6PIJ6 1188 aa14.67□□□□□ -0.06
TOP3B-204ENST00000430142 DET1Q7L5Y6 550 aa14.67□□□□□ -0.06
TOP3B-204ENST00000430142 GLT6D1Q7Z4J2 308 aa14.67□□□□□ -0.06
TOP3B-204ENST00000430142 TMEM126BQ8IUX1 230 aa14.67□□□□□ -0.06
TOP3B-204ENST00000430142 SPDYE1Q8NFV5 336 aaPredicted RBP14.67□□□□□ -0.06
TOP3B-204ENST00000430142 OXNAD1Q96HP4 312 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms