RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 DLSTP36957 453 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 ATP5OP48047 213 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 XIAPP98170 497 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 OTUD4Q01804 1114 aaKnown RBP15.18■□□□□ 0.02
SEC13-210ENST00000428626 IL11RAQ14626 422 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 CRTC2Q53ET0 693 aaPredicted RBP15.18■□□□□ 0.02
SEC13-210ENST00000428626 FNBP1LQ5T0N5 605 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 ZDHHC20Q5W0Z9 365 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 METRNLQ641Q3 311 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 SARM1Q6SZW1 724 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 RASGRP3Q8IV61 690 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 OR4K2Q8NGD2 314 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 ACTL9Q8TC94 416 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 ZNF398Q8TD17 642 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 ZDHHC12Q96GR4 267 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 ABHD17AQ96GS6 310 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 RBM41Q96IZ5 413 aaKnown RBP15.18■□□□□ 0.02
SEC13-210ENST00000428626 PPM1MQ96MI6 270 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 RUFY1Q96T51 708 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 MAP3K3Q99759 626 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 EFHD1Q9BUP0 239 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 WWP1Q9H0M0 922 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 LNPEPQ9UIQ6 1025 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 TRHDEQ9UKU6 1024 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 REXO2Q9Y3B8 237 aaKnown RBP15.18■□□□□ 0.02
SEC13-210ENST00000428626 PKP3Q9Y446 797 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 KCNMB2Q9Y691 235 aa15.18■□□□□ 0.02
SEC13-210ENST00000428626 DNMT3AQ9Y6K1 912 aaPredicted RBP15.18■□□□□ 0.02
SEC13-210ENST00000428626 LRRK2Q5S007 2527 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 STX7O15400 261 aaKnown RBP15.17■□□□□ 0.02
SEC13-210ENST00000428626 ARHGAP6O43182 974 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 KCNJ13O60928 360 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 EBLN1P0CF75 366 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 MTHFD1P11586 935 aaKnown RBP15.17■□□□□ 0.02
SEC13-210ENST00000428626 NR1D1P20393 614 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 CTNNA1P35221 906 aaKnown RBP15.17■□□□□ 0.02
SEC13-210ENST00000428626 HALP42357 657 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 XRCC4Q13426 336 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 ITGA9Q13797 1035 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.17■□□□□ 0.02
SEC13-210ENST00000428626 DENND5AQ6IQ26 1287 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 PWWP2BQ6NUJ5 590 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 DAAM2Q86T65 1068 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 OR13C4Q8NGS5 318 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 C9orf43Q8TAL5 461 aaPredicted RBP15.17■□□□□ 0.02
SEC13-210ENST00000428626 APOBEC4Q8WW27 367 aaKnown RBP15.17■□□□□ 0.02
SEC13-210ENST00000428626 ALG3Q92685 438 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 NRTNQ99748 197 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 FSD1LQ9BXM9 530 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 ZCCHC2Q9C0B9 1178 aaKnown RBP15.17■□□□□ 0.02
SEC13-210ENST00000428626 IMP3Q9NV31 184 aaKnown RBP15.17■□□□□ 0.02
SEC13-210ENST00000428626 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.17■□□□□ 0.02
SEC13-210ENST00000428626 FAM8A1Q9UBU6 413 aa15.17■□□□□ 0.02
SEC13-210ENST00000428626 MGAT4DA6NG13 374 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 SOWAHDA6NJG2 315 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 AGAP14A8MT82 685 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 CCL22O00626 93 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 PJA2O43164 708 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 SRP72O76094 671 aaKnown RBP15.16■□□□□ 0.02
SEC13-210ENST00000428626 LPOP22079 712 aaPredicted RBP15.16■□□□□ 0.02
SEC13-210ENST00000428626 GEMP55040 296 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 TUBB3Q13509 450 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 ERV3-1Q14264 604 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 SPARCL1Q14515 664 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 TAF1AQ15573 450 aaPredicted RBP15.16■□□□□ 0.02
SEC13-210ENST00000428626 ANKRD20A2Q5SQ80 823 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 ANKRD20A1Q5TYW2 823 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 ANKRD20A3Q5VUR7 823 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 FBXO38Q6PIJ6 1188 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 PPP1R3BQ86XI6 285 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 CCDC110Q8TBZ0 833 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 CT55Q8WUE5 264 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 STAMBPL1Q96FJ0 436 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 RMDN2Q96LZ7 410 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 TRIM5Q9C035 493 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 PCDHA3Q9Y5H8 950 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 MED13Q9UHV7 2174 aa15.16■□□□□ 0.02
SEC13-210ENST00000428626 OR5K3A6NET4 321 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 KATNA1O75449 491 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 ANXA9O76027 345 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 MSH3P20585 1137 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 AKT1P31749 480 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 ARCN1P48444 511 aaKnown RBP15.15■□□□□ 0.02
SEC13-210ENST00000428626 CDKN1CP49918 316 aaPredicted RBP15.15■□□□□ 0.02
SEC13-210ENST00000428626 ZNF140P52738 457 aaPredicted RBP15.15■□□□□ 0.02
SEC13-210ENST00000428626 MC1RQ01726 317 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 PLCL1Q15111 1095 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 IGFBP7Q16270 282 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 LONRF2Q1L5Z9 754 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 FAM199XQ6PEV8 388 aaPredicted RBP15.15■□□□□ 0.02
SEC13-210ENST00000428626 CCDC170Q8IYT3 715 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 SIDT2Q8NBJ9 832 aaKnown RBP15.15■□□□□ 0.02
SEC13-210ENST00000428626 OR2L2Q8NH16 312 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 UBXN4Q92575 508 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 C12orf66Q96MD2 445 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 ANP32EQ9BTT0 268 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 OSBPL8Q9BZF1 889 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 LACRTQ9GZZ8 138 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 FAM96AQ9H5X1 160 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 ASB8Q9H765 288 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms