RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 RIN1Q13671 783 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 IL18Q14116 193 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 CCL14Q16627 93 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 B3GNT6Q6ZMB0 384 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 POLNQ7Z5Q5 900 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 EIF1ADQ8N9N8 165 aaKnown RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 C1orf216Q8TAB5 229 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 CKAP2Q8WWK9 683 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 RFKQ969G6 155 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 PLD4Q96BZ4 506 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 LGMNQ99538 433 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 MGME1Q9BQP7 344 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 PDZD7Q9H5P4 517 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 SNX15Q9NRS6 342 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 SIRPGQ9P1W8 387 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 CLEC4AQ9UMR7 237 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 MAP4K5Q9Y4K4 846 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ATRNL1Q5VV63 1379 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 FAM237BA0A1B0GVD1 139 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 CPED1A4D0V7 1026 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 FADS2P1A8MWK0 482 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 TP73O15350 636 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 SLC31A1O15431 190 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 AOC2O75106 756 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ANXA4P09525 319 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ZNF20P17024 532 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 RYKP34925 604 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 CCNFP41002 786 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 MLLT3P42568 568 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 GALK1P51570 392 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 IFI35P80217 286 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 SNTA1Q13424 505 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 KCTD21Q4G0X4 260 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ABCA11PQ4W5N1 156 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 RNASEH2BQ5TBB1 312 aaKnown RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 COX18Q8N8Q8 333 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 OR4K2Q8NGD2 314 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 HOPXQ9BPY8 73 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 FGFBP2Q9BYJ0 223 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 GLS2Q9UI32 602 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 CD84Q9UIB8 345 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 MEMO1Q9Y316 297 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 A0A075B6Q4 140 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 PLK4O00444 970 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 B4GALT4O60513 344 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 NOS1APO75052 506 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ENTPD5O75356 428 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 STK16O75716 305 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 IFNW1P05000 195 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 FABP3P05413 133 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 CD2P06729 351 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 HNRNPLP14866 589 aaKnown RBP eCLIP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 CPN2P22792 545 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ARL2P36404 184 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 CEBPGP53567 150 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ADARP55265 1226 aaKnown RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 NOMO3P69849 1222 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ZNF844Q08AG5 666 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.84□□□□□ -0.997e-7■■□□□ 12.2
CTNND1-208ENST00000428599 RNASE12Q5GAN4 147 aaKnown RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 AADACL2Q6P093 401 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 HSDL2Q6YN16 418 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 IRGQQ8WZA9 623 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 TSSK3Q96PN8 268 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 GPR88Q9GZN0 384 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 LDAHQ9H6V9 325 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 NMUR1Q9HB89 426 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ARHGEF4Q9NR80 690 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ATXN10Q9UBB4 475 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 CNOT6Q9ULM6 557 aaKnown RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 PSMD9O00233 223 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ECHS1P30084 290 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 MAT2AP31153 395 aaKnown RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 KHKP50053 298 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 CASP6P55212 293 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 VLDLRP98155 873 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 SLC25A3Q00325 362 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 SEMA5AQ13591 1074 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ZNF311Q5JNZ3 666 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 PHF19Q5T6S3 580 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 SYVN1Q86TM6 617 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 AVL9Q8NBF6 648 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 OR4C6Q8NH72 309 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 WFIKKN2Q8TEU8 576 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 PLEKHG4BQ96PX9 1271 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 DHX33Q9H6R0 707 aaKnown RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 L1RE1Q9UN81 338 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 ZNF142P52746 1687 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 MSI1O43347 362 aaKnown RBP8.84□□□□□ -1
CTNND1-208ENST00000428599 ABHD2P08910 425 aa8.84□□□□□ -1
CTNND1-208ENST00000428599 OR4Q2P0C623 313 aa8.84□□□□□ -1
CTNND1-208ENST00000428599 RHOQP17081 205 aa8.84□□□□□ -1
CTNND1-208ENST00000428599 STRADAQ7RTN6 431 aa8.84□□□□□ -1
CTNND1-208ENST00000428599 CUZD1Q86UP6 607 aa8.84□□□□□ -1
CTNND1-208ENST00000428599 CLHC1Q8NHS4 586 aa8.84□□□□□ -1
CTNND1-208ENST00000428599 BRSK1Q8TDC3 778 aa8.84□□□□□ -1
CTNND1-208ENST00000428599 C11orf24Q96F05 449 aaPredicted RBP8.84□□□□□ -1
CTNND1-208ENST00000428599 MRPS30Q9NP92 439 aaKnown RBP8.84□□□□□ -1
CTNND1-208ENST00000428599 WASF3Q9UPY6 502 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms