RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ST13P5Q8NFI4 369 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-206ENST00000428313 DEDD2Q8WXF8 326 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 PYCR2Q96C36 320 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 SIGLEC11Q96RL6 698 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 ENTPD7Q9NQZ7 604 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 IL20Q9NYY1 176 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 KLHL8Q9P2G9 620 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-206ENST00000428313 C9JVG2 144 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 NFIBO00712 420 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 VPS4BO75351 444 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 PDGFAP04085 211 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 ICAM1P05362 532 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 ACADMP11310 421 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 CYP2B6P20813 491 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 TIE1P35590 1138 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 PIK3CBP42338 1070 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 TAS2R39P59534 338 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 GRB7Q14451 532 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 PGM5Q15124 567 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 DDR2Q16832 855 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 PAGE3Q5JUK9 113 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 CAPN13Q6MZZ7 669 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-206ENST00000428313 FAM171BQ6P995 826 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 SPESP1Q6UW49 350 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 EFL1Q7Z2Z2 1120 aaKnown RBP15.89■□□□□ 0.13
C9orf3-206ENST00000428313 AMIGO3Q86WK7 504 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 ZNF540Q8NDQ6 660 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 ZSCAN5AQ9BUG6 496 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 DPEP3Q9H4B8 488 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 CYP3A43Q9HB55 503 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 TEKT2Q9UIF3 430 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 TMEFF2Q9UIK5 374 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-206ENST00000428313 KLHL21Q9UJP4 597 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 STOML2Q9UJZ1 356 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 DNAJC15Q9Y5T4 150 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 GPR45Q9Y5Y3 372 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 AUP1Q9Y679 476 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 STX7O15400 261 aaKnown RBP15.88■□□□□ 0.13
C9orf3-206ENST00000428313 ZNF30P17039 623 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 EFNA1P20827 205 aaPredicted RBP15.88■□□□□ 0.13
C9orf3-206ENST00000428313 ARL2P36404 184 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 LIPAP38571 399 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 CRKP46108 304 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 GZMKP49863 264 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 KIAA0319Q5VV43 1072 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 ADHFE1Q8IWW8 467 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 HS3ST5Q8IZT8 346 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 OR4M1Q8NGD0 313 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 PPP1R13LQ8WUF5 828 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 CLEC4DQ8WXI8 215 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 HEXIM2Q96MH2 286 aaKnown RBP15.88■□□□□ 0.13
C9orf3-206ENST00000428313 CCDC115Q96NT0 180 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 TM9SF2Q99805 663 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 SMPD4Q9NXE4 827 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 CPSF3Q9UKF6 684 aaKnown RBP15.88■□□□□ 0.13
C9orf3-206ENST00000428313 AP3M1Q9Y2T2 418 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 IPPQ9Y573 584 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 COL11A2P13942 1736 aaPredicted RBP15.88■□□□□ 0.13
C9orf3-206ENST00000428313 NRXN2Q9P2S2 1712 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 LINC00862A6NCI5 91 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 GNGT2O14610 69 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 C1RP00736 705 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 RPLP0P05388 317 aaKnown RBP15.88■□□□□ 0.13
C9orf3-206ENST00000428313 LCKP06239 509 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 LTA4HP09960 611 aaKnown RBP15.88■□□□□ 0.13
C9orf3-206ENST00000428313 CBLP22681 906 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 SOX11P35716 441 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 SLC12A2P55011 1212 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 CDH13P55290 713 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 HUNKP57058 714 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 CSHL1Q14406 222 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 PLA2G4EQ3MJ16 856 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 ZNF678Q5SXM1 525 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 ARMC4Q5T2S8 1044 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 HDDC2Q7Z4H3 204 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 SPATA19Q7Z5L4 167 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 NECAB2Q7Z6G3 386 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 CCNYQ8ND76 341 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 TMEM143Q96AN5 459 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 UCK2Q9BZX2 261 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 PRDM12Q9H4Q4 367 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 TMEM45AQ9NWC5 275 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 C14orf119Q9NWQ9 140 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 MAP3K20Q9NYL2 800 aaKnown RBP15.88■□□□□ 0.13
C9orf3-206ENST00000428313 NUFIP1Q9UHK0 495 aaKnown RBP15.88■□□□□ 0.13
C9orf3-206ENST00000428313 ATPIF1Q9UII2 106 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 CDH9Q9ULB4 789 aa15.88■□□□□ 0.13
C9orf3-206ENST00000428313 ANK1P16157 1881 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 TRIP11Q15643 1979 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 TRIM3O75382 744 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-206ENST00000428313 USP2O75604 605 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-206ENST00000428313 PRLP01236 227 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 ALPPP05187 535 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 PFKMP08237 780 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 CYP2A6P11509 494 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-206ENST00000428313 GADD45AP24522 165 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 PTPN3P26045 913 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 DCTP40126 519 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 ZFP36L2P47974 494 aaKnown RBP15.87■□□□□ 0.13
C9orf3-206ENST00000428313 MAPK12P53778 367 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms