RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 Q6ZVL8 140 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 AMIGO2Q86SJ2 522 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 C17orf64Q86WR6 236 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 KRT78Q8N1N4 520 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 WDTC1Q8N5D0 677 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 MFSD3Q96ES6 412 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 HSPBAP1Q96EW2 488 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 OTUB1Q96FW1 271 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 POMKQ9H5K3 350 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 COPG2Q9UBF2 871 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 RSL24D1Q9UHA3 163 aaKnown RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 FKBPLQ9UIM3 349 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 FZD10Q9ULW2 581 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 MYRFQ9Y2G1 1151 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 TBC1D30Q9Y2I9 924 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 TMEM98Q9Y2Y6 226 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 TEX264Q9Y6I9 313 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 CACNA1EQ15878 2313 aa10.52□□□□□ -0.72
TCOF1-204ENST00000427724 NR5A2O00482 541 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 CPSF4O95639 269 aaKnown RBP10.52□□□□□ -0.73
TCOF1-204ENST00000427724 JUNDP17535 347 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 PRKAG1P54619 331 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 ENPEPQ07075 957 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 CACHD1Q5VU97 1274 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 POTEHQ6S545 545 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 CYP20A1Q6UW02 462 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 ADGRD2Q7Z7M1 963 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 NPAS3Q8IXF0 933 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 JPH3Q8WXH2 748 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-204ENST00000427724 KIAA1143Q96AT1 154 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-204ENST00000427724 FOXQ1Q9C009 403 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 HAPLN2Q9GZV7 340 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 CRISPLD2Q9H0B8 497 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 CHRAC1Q9NRG0 131 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 PSME2Q9UL46 239 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 MAFFQ9ULX9 164 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 URADA6NGE7 173 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 SLCO1B7G3V0H7 640 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 ERAL1O75616 437 aaKnown RBP10.52□□□□□ -0.73
TCOF1-204ENST00000427724 ABCB1P08183 1280 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-204ENST00000427724 CCDC166P0CW27 439 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 GNAZP19086 355 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 MPSTP25325 297 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 RBMS1P29558 406 aaKnown RBP10.52□□□□□ -0.73
TCOF1-204ENST00000427724 GJA4P35212 333 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 NEK2P51955 445 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 KCNK10P57789 538 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 ACSM2AQ08AH3 577 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 TRAF2Q12933 501 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 CST6Q15828 149 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 ACSM2BQ68CK6 577 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 RALGPS2Q86X27 583 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-204ENST00000427724 GKN2Q86XP6 184 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 TAGAPQ8N103 731 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 OR52K2Q8NGK3 314 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 PEBP4Q96S96 227 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 PARVBQ9HBI1 364 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 PLGRKTQ9HBL7 147 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 PTTG2Q9NZH5 202 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 DMTF1Q9Y222 760 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 EIF3LQ9Y262 564 aaKnown RBP10.52□□□□□ -0.73
TCOF1-204ENST00000427724 C16orf96A6NNT2 1141 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 PLK4O00444 970 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 HDAC3O15379 428 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 ITM2AO43736 263 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 DEAF1O75398 565 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-204ENST00000427724 SERPINB1P30740 379 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 CLCNKAP51800 687 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 RGS1Q08116 209 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 CNTN1Q12860 1018 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 KLF10Q13118 480 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 DUSP6Q16828 381 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 ZDHHC20Q5W0Z9 365 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 CHMP1BQ7LBR1 199 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 DSELQ8IZU8 1212 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 NXPE3Q969Y0 559 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 PIWIL1Q96J94 861 aaKnown RBP10.52□□□□□ -0.73
TCOF1-204ENST00000427724 KATNBL1Q9H079 304 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 ATG10Q9H0Y0 220 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 ALG9Q9H6U8 611 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 DTLQ9NZJ0 730 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 CDH22Q9UJ99 828 aa10.52□□□□□ -0.73
TCOF1-204ENST00000427724 RNGTTO60942 597 aaKnown RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 KRT8P05787 483 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 FASTKQ14296 549 aaKnown RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 PFKFB4Q16877 469 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 CROCCP3Q8IVE0 287 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 MFSD6LQ8IWD5 586 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 ENDOVQ8N8Q3 282 aaKnown RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 KBTBD7Q8WVZ9 684 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 CCDC126Q96EE4 140 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 MIPEPQ99797 713 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 ATP6AP2A0A1C7CYW4 349 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 EVPLLA8MZ36 301 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 ATP6AP2O75787 350 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 RPP40O75818 363 aaKnown RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 HNRNPLP14866 589 aaKnown RBP eCLIP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 TPSB2P20231 275 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 PIK3R1P27986 724 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 DLG1Q12959 904 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms