RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 RIMS3Q9UJD0 308 aa8.43□□□□□ -1.06
SH3D19-204ENST00000427414 ACTL7AQ9Y615 435 aa8.43□□□□□ -1.06
SH3D19-204ENST00000427414 WNT6Q9Y6F9 365 aa8.43□□□□□ -1.06
SH3D19-204ENST00000427414 GLYATL1P3A0A0U1RQE8 302 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 K7ERQ8 282 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 ZNF195O14628 629 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 SLC16A5O15375 505 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 TULP3O75386 442 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 IPO13O94829 963 aaKnown RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 SBK3P0C264 359 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 ENO3P13929 434 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 GLULP15104 373 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 XRCC1P18887 633 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 ARRB2P32121 409 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 CD97P48960 835 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 THOP1P52888 689 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 TIAL1Q01085 375 aaKnown RBP eCLIP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 PDAP1Q13442 181 aaKnown RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 RUNX3Q13761 415 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 C16orf72Q14CZ0 275 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 AGERQ15109 404 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 CRTC1Q6UUV9 634 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 DPY19L3Q6ZPD9 716 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 EFL1Q7Z2Z2 1120 aaKnown RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 LYSMD3Q7Z3D4 306 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 KDELC2Q7Z4H8 507 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 RAB44Q7Z6P3 723 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 PATL1Q86TB9 770 aaKnown RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 TICAM1Q8IUC6 712 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 TMEM126BQ8IUX1 230 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 TRAM1L1Q8N609 369 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 NXNL1Q96CM4 212 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 HDAC8Q9BY41 377 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 SMG9Q9H0W8 520 aaKnown RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 BRD9Q9H8M2 597 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 RDH14Q9HBH5 336 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 TBCCD1Q9NVR7 557 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 ZDHHC3Q9NYG2 299 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 FKBPLQ9UIM3 349 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 PADI4Q9UM07 663 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 KCTD3Q9Y597 815 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 C1orf232A0A0U1RR37 186 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 SH3PXD2BA1X283 911 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 TTC24A2A3L6 582 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 TRPC5OSA6NMA1 111 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 ANHXE9PGG2 379 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 GAPDHSO14556 408 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 GJB3O75712 270 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 FGF4P08620 206 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 CD1EP15812 388 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 NELFEP18615 380 aaKnown RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 SPINT3P49223 89 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 NUMBP49757 651 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 ENTPD1P49961 510 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 CDK9P50750 372 aaKnown RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 PKNOX1P55347 436 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 SEMA3AQ14563 771 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 ELAVL3Q14576 367 aaKnown RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 NRF1Q16656 503 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 TTLL9Q3SXZ7 439 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 TMEM52BQ4KMG9 183 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 RBM20Q5T481 1227 aaKnown RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 TMEM215Q68D42 235 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 ERAP2Q6P179 960 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 C16orf89Q6UX73 402 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 BNC2Q6ZN30 1099 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 ISCA2Q86U28 154 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 BHLHE22Q8NFJ8 381 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 AGR3Q8TD06 166 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 KCTD4Q8WVF5 259 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 OR8D1Q8WZ84 308 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 EXOC2Q96KP1 924 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 ZSCAN5AQ9BUG6 496 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 NUF2Q9BZD4 464 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 PRO3102Q9H379 93 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 CAAP1Q9H8G2 361 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 PLGRKTQ9HBL7 147 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 PFDN4Q9NQP4 134 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 THAP10Q9P2Z0 257 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 PRPF19Q9UMS4 504 aaKnown RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 COL4A2P08572 1712 aa8.42□□□□□ -1.06
SH3D19-204ENST00000427414 KIAA0100Q14667 2235 aaKnown RBP8.42□□□□□ -1.06
SH3D19-204ENST00000427414 DLX3O60479 287 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 RHOBTB1O94844 696 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 ENO2P09104 434 aaPredicted RBP8.41□□□□□ -1.06
SH3D19-204ENST00000427414 MPC1LP0DKB6 136 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 ZNF23P17027 643 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 FUT4P22083 530 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 PBX2P40425 430 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 MRPL19P49406 292 aaKnown RBP8.41□□□□□ -1.06
SH3D19-204ENST00000427414 RGS4P49798 205 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 CDKN2DP55273 166 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 IL2P60568 153 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 MS4A2Q01362 244 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 GBX1Q14549 363 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 SMAD1Q15797 465 aaKnown RBP8.41□□□□□ -1.06
SH3D19-204ENST00000427414 SLC9B1Q4ZJI4 515 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 FAM46CQ5VWP2 391 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 VITQ6UXI7 678 aa8.41□□□□□ -1.06
SH3D19-204ENST00000427414 Q6ZNX1 250 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms