RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 C11orf96Q7Z7L8 435 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 SERPINA9Q86WD7 417 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 PHYKPLQ8IUZ5 450 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 ZNF547Q8IVP9 402 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 PDIK1LQ8N165 341 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 NXPE1Q8N323 547 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 RASGEF1AQ8N9B8 481 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 ZNF548Q8NEK5 533 aaPredicted RBP7.31□□□□□ -1.24
LINC01049-201ENST00000426840 OR6P1Q8NGX9 317 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 GDAP1Q8TB36 358 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 FBXO25Q8TCJ0 367 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 GPBAR1Q8TDU6 330 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 LRRC39Q96DD0 335 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 STAMBPL1Q96FJ0 436 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 CAMK1GQ96NX5 476 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 LRRC61Q9BV99 259 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 SLC13A1Q9BZW2 595 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 RAB17Q9H0T7 212 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 RMI1Q9H9A7 625 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 CARS2Q9HA77 564 aaKnown RBP7.31□□□□□ -1.24
LINC01049-201ENST00000426840 EPB41L5Q9HCM4 733 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 ZDHHC18Q9NUE0 388 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 TRNAU1APQ9NX07 287 aaKnown RBP7.31□□□□□ -1.24
LINC01049-201ENST00000426840 NOP53Q9NZM5 478 aaKnown RBP7.31□□□□□ -1.24
LINC01049-201ENST00000426840 MARCH4Q9P2E8 410 aaPredicted RBP7.31□□□□□ -1.24
LINC01049-201ENST00000426840 SPASTQ9UBP0 616 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 SLC23A2Q9UGH3 650 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 APOBEC3BQ9UH17 382 aaKnown RBP7.31□□□□□ -1.24
LINC01049-201ENST00000426840 ZNHIT2Q9UHR6 403 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 CRLS1Q9UJA2 301 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 PRKAB1Q9Y478 270 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 MAD1L1Q9Y6D9 718 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 TEX264Q9Y6I9 313 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 NEMP2A6NFY4 417 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 A6NHS1 94 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 PRR19A6NJB7 356 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 GPR89AB7ZAQ6 455 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 LMO7DNF2Z398 122 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 TPP1O14773 563 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 EIF3HO15372 352 aaKnown RBP eCLIP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 CD3EAPO15446 510 aaKnown RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 GRID2O43424 1007 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 RGS9O75916 674 aaPredicted RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 USP1O94782 785 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 GPR89BP0CG08 455 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 CTSEP14091 401 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 ACRV1P26436 265 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 AK4P27144 223 aaPredicted RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 ELK3P41970 407 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 GNPDA1P46926 289 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 CTSCP53634 463 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 ARL4CP56559 192 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 GPLD1P80108 840 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 GUCY2DQ02846 1103 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 CAV1Q03135 178 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 PLAURQ03405 335 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 PDIA2Q13087 525 aaKnown RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 ITIH4Q14624 930 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 FASTKD3Q14CZ7 662 aaKnown RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 ELOCQ15369 112 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 RSPO4Q2I0M5 234 aaPredicted RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 PLA2G4EQ3MJ16 856 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 DNAJC21Q5F1R6 531 aaKnown RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 DNTTIP2Q5QJE6 756 aaKnown RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 HP1BP3Q5SSJ5 553 aaPredicted RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 PERM1Q5SV97 790 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 OGFOD3Q6PK18 319 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 LVRNQ6Q4G3 990 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 TMEM220Q6QAJ8 160 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 AFTPHQ6ULP2 937 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 CERS6Q6ZMG9 384 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 CHST15Q7LFX5 561 aaPredicted RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 LDB1Q86U70 411 aaPredicted RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 CCNJLQ8IV13 435 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 UNC5BQ8IZJ1 945 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 SDR16C5Q8N3Y7 309 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 FSTL5Q8N475 847 aaPredicted RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 EID2Q8N6I1 236 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 GPR150Q8NGU9 434 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 OR4C6Q8NH72 309 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 NAT14Q8WUY8 206 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 ZNF669Q96BR6 464 aaPredicted RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 ULK4Q96C45 1275 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 SGF29Q96ES7 293 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 OR2M4Q96R27 311 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 COPS8Q99627 209 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 NAT9Q9BTE0 207 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 BOCQ9BWV1 1114 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 FAM114A2Q9NRY5 505 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 SPATS2LQ9NUQ6 558 aaKnown RBP7.3□□□□□ -1.24
LINC01049-201ENST00000426840 DLL3Q9NYJ7 618 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 SAMD15Q9P1V8 674 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 PCOLCE2Q9UKZ9 415 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 GPR34Q9UPC5 381 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 PRSS21Q9Y6M0 314 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 RPS6KL1Q9Y6S9 549 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 ZNF292O60281 2723 aa7.3□□□□□ -1.24
LINC01049-201ENST00000426840 GOLGA4Q13439 2230 aaKnown RBP7.29□□□□□ -1.24
LINC01049-201ENST00000426840 CEP250Q9BV73 2442 aa7.29□□□□□ -1.24
LINC01049-201ENST00000426840 LY6G6EA0A0G2JKS1 128 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms