RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 IL23RQ5VWK5 629 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 KHDRBS2Q5VWX1 349 aaKnown RBP13.7□□□□□ -0.22
RPL28-202ENST00000426763 LRRC66Q68CR7 880 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 CLEC6AQ6EIG7 209 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 PROSER1Q86XN7 944 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 RSPH9Q9H1X1 276 aaPredicted RBP13.7□□□□□ -0.22
RPL28-202ENST00000426763 NDUFA13Q9P0J0 144 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 FYNP06241 537 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 HSMCR30P0CW71 290 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 ATP1B2P14415 290 aaPredicted RBP13.69□□□□□ -0.22
RPL28-202ENST00000426763 SOX6P35712 828 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 NRLP54845 237 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 ADGRG2Q8IZP9 1017 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 SLC43A3Q8NBI5 491 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 GATA5Q9BWX5 397 aaPredicted RBP13.69□□□□□ -0.22
RPL28-202ENST00000426763 WDR6Q9NNW5 1121 aaKnown RBP13.69□□□□□ -0.22
RPL28-202ENST00000426763 DDX18Q9NVP1 670 aaKnown RBP13.69□□□□□ -0.22
RPL28-202ENST00000426763 CHURC1-FNTBB4DL54 471 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 NIPSNAP2O75323 286 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 CAPN1P07384 714 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 HLA-EP13747 358 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 METTL21CQ5VZV1 264 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 LRRC74BQ6ZQY2 392 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 DCBLD1Q8N8Z6 715 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 PYDC1Q8WXC3 89 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 ZNF641Q96N77 438 aaPredicted RBP13.69□□□□□ -0.22
RPL28-202ENST00000426763 SMAD5Q99717 465 aaKnown RBP13.69□□□□□ -0.22
RPL28-202ENST00000426763 ACSS2Q9NR19 701 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 TCHHQ07283 1943 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 SLX4Q8IY92 1834 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 A0A0D9SEW6 157 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 SOCS7O14512 581 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 YTHDF3Q7Z739 585 aaKnown RBP13.69□□□□□ -0.22
RPL28-202ENST00000426763 ANKRD27Q96NW4 1050 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 TSGA13Q96PP4 275 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 SH3GL2Q99962 352 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 OSER1Q9NX31 292 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 C2orf78A6NCI8 922 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 HEPACAM2A8MVW5 462 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 SOCS5O75159 536 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 MYL12AP19105 171 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 NT5EP21589 574 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 KLF10Q13118 480 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 TERB1Q8NA31 727 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 PHF10Q8WUB8 498 aaKnown RBP13.69□□□□□ -0.22
RPL28-202ENST00000426763 LMAN2LQ9H0V9 348 aa13.69□□□□□ -0.22
RPL28-202ENST00000426763 TJP1Q07157 1748 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 K7EPI3 171 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 SUV39H1O43463 412 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 MAN1A2O60476 641 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 SIN3BO75182 1162 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 CA3P07451 260 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 PRPS2P11908 318 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 TCF3P15923 654 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 HOXB6P17509 224 aaKnown RBP13.68□□□□□ -0.22
RPL28-202ENST00000426763 HNMTP50135 292 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 PRKD1Q15139 912 aaPredicted RBP13.68□□□□□ -0.22
RPL28-202ENST00000426763 PAQR3Q6TCH7 311 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 PIWIL1Q96J94 861 aaKnown RBP13.68□□□□□ -0.22
RPL28-202ENST00000426763 FNDC11Q9BVV2 318 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 TBC1D10AQ9BXI6 508 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 GSDMCQ9BYG8 508 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 NSUN3Q9H649 340 aaKnown RBP13.68□□□□□ -0.22
RPL28-202ENST00000426763 ZDHHC18Q9NUE0 388 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 MAGEL2Q9UJ55 1249 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 GJD2Q9UKL4 321 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 PRR5-ARHGAP8B1AHC4 643 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 SLC7A2P52569 658 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 ARHGAP8P85298 464 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 ARHGAP36Q6ZRI8 547 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 TMCO2Q7Z6W1 182 aaPredicted RBP13.68□□□□□ -0.22
RPL28-202ENST00000426763 WDTC1Q8N5D0 677 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 BANPQ8N9N5 519 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 ZNF784Q8NCA9 323 aaPredicted RBP13.68□□□□□ -0.22
RPL28-202ENST00000426763 STC2O76061 302 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 EPOP01588 193 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 WDR5P61964 334 aaKnown RBP13.68□□□□□ -0.22
RPL28-202ENST00000426763 LMAN2Q12907 356 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 GK5Q6ZS86 529 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 EXOSC8Q96B26 276 aaKnown RBP13.68□□□□□ -0.22
RPL28-202ENST00000426763 CDCA3Q99618 268 aaPredicted RBP13.68□□□□□ -0.22
RPL28-202ENST00000426763 FEM1AQ9BSK4 669 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 C12orf65Q9H3J6 166 aaKnown RBP13.68□□□□□ -0.22
RPL28-202ENST00000426763 HAS3O00219 553 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 ZCCHC18P0CG32 403 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 CBSLP0DN79 551 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 CBSP35520 551 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 MINDY4Q4G0A6 757 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 MARCH8Q5T0T0 291 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 UMODL1-AS1Q8N2C9 162 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 SCAIQ8N9R8 606 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 OR2T12Q8NG77 320 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 ZCCHC10Q8TBK6 192 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 ADI1Q9BV57 179 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 SCN7AQ01118 1682 aa13.68□□□□□ -0.22
RPL28-202ENST00000426763 MTX2O75431 263 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 RFPL2O75678 378 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 AVPR1BP47901 424 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 DEFA1P59665 94 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 DEFA3P59666 94 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms