RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 RNF187Q5TA31 235 aaPredicted RBP14.54□□□□□ -0.08
TMEM248-204ENST00000424964 AGAP9Q5VTM2 703 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 METRNLQ641Q3 311 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 ZNF449Q6P9G9 518 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 ABRAXAS1Q6UWZ7 409 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 WASH2PQ6VEQ5 465 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 UNC5AQ6ZN44 842 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 SLC9B2Q86UD5 537 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 KCNMB4Q86W47 210 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 CCDC25Q86WR0 208 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 CILP2Q8IUL8 1156 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 TRIM48Q8IWZ4 208 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 ZBED8Q8IZ13 594 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 UNC5BQ8IZJ1 945 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 SFRP1Q8N474 314 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 CHCHD4Q8N4Q1 142 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 FBXO36Q8NEA4 188 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 GABPB2Q8TAK5 448 aaPredicted RBP14.54□□□□□ -0.08
TMEM248-204ENST00000424964 FBXO25Q8TCJ0 367 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 PYROXD1Q8WU10 500 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 ELMO1Q92556 727 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 CCDC3Q9BQI4 270 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 TSSK1BQ9BXA7 367 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 SYNDIG1Q9H7V2 258 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 SAYSD1Q9NPB0 183 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 PPANQ9NQ55 473 aaKnown RBP14.54□□□□□ -0.08
TMEM248-204ENST00000424964 WASH6PQ9NQA3 447 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 IARS2Q9NSE4 1012 aaKnown RBP14.54□□□□□ -0.08
TMEM248-204ENST00000424964 SCHIP1Q9P0W5 487 aaPredicted RBP14.54□□□□□ -0.08
TMEM248-204ENST00000424964 ACSL5Q9ULC5 683 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 UNC13CQ8NB66 2214 aa14.54□□□□□ -0.08
TMEM248-204ENST00000424964 PPM1DO15297 605 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 EIF3HO15372 352 aaKnown RBP eCLIP14.53□□□□□ -0.08
TMEM248-204ENST00000424964 OPA1O60313 960 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 VIPP01282 170 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 GSTM1P09488 218 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 ERVK-10P10266 1014 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 BRAFP15056 766 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 ALDH4A1P30038 563 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 FMO4P31512 558 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 DEKP35659 375 aaKnown RBP14.53□□□□□ -0.08
TMEM248-204ENST00000424964 PPM1FP49593 454 aaPredicted RBP14.53□□□□□ -0.08
TMEM248-204ENST00000424964 EIF3BP55884 814 aaKnown RBP14.53□□□□□ -0.08
TMEM248-204ENST00000424964 GSTM4Q03013 218 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 HHEXQ03014 270 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 CLCA4Q14CN2 919 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 BRD3Q15059 726 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 TYSND1Q2T9J0 566 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 ZDHHC24Q6UX98 284 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 RAB44Q7Z6P3 723 aaPredicted RBP14.53□□□□□ -0.08
TMEM248-204ENST00000424964 LRRC6Q86X45 466 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 DENND6AQ8IWF6 608 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 LMNTD2Q8IXW0 634 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 LILRA3Q8N6C8 439 aaPredicted RBP14.53□□□□□ -0.08
TMEM248-204ENST00000424964 CXorf40BQ96DE9 158 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 WDR83Q9BRX9 315 aaKnown RBP14.53□□□□□ -0.08
TMEM248-204ENST00000424964 FAM167BQ9BTA0 163 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 WWP1Q9H0M0 922 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 COG4Q9H9E3 785 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 FAM114A2Q9NRY5 505 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 INTS10Q9NVR2 710 aaKnown RBP14.53□□□□□ -0.08
TMEM248-204ENST00000424964 CPNE7Q9UBL6 633 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 DMGDHQ9UI17 866 aaKnown RBP14.53□□□□□ -0.08
TMEM248-204ENST00000424964 RABGEF1Q9UJ41 708 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 GNPTGQ9UJJ9 305 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 VPS9D1Q9Y2B5 631 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 WDR37Q9Y2I8 494 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 CRYL1Q9Y2S2 319 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 KNTC1P50748 2209 aa14.53□□□□□ -0.08
TMEM248-204ENST00000424964 OR52A4PA6NMU1 304 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 IQCF5A8MTL0 148 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 ZW10O43264 779 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 HYAL3O43820 417 aaPredicted RBP14.52□□□□□ -0.09
TMEM248-204ENST00000424964 S1PR4O95977 384 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 ADRB1P08588 477 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 SLC35G4P0C7Q5 338 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 PNLIPP16233 465 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 XRCC1P18887 633 aaPredicted RBP14.52□□□□□ -0.09
TMEM248-204ENST00000424964 SLC19A1P41440 591 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 SLC1A2P43004 574 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 FASLGP48023 281 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 OR1D5P58170 312 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 CCL7P80098 99 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 INSM1Q01101 510 aaPredicted RBP14.52□□□□□ -0.09
TMEM248-204ENST00000424964 BOP1Q14137 746 aaKnown RBP14.52□□□□□ -0.09
TMEM248-204ENST00000424964 SYTL3Q4VX76 610 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 STEAP4Q687X5 459 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 NAPRTQ6XQN6 538 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 ZNF761Q86XN6 746 aaPredicted RBP14.52□□□□□ -0.09
TMEM248-204ENST00000424964 PALM2Q8IXS6 379 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 KRT222Q8N1A0 295 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 AVL9Q8NBF6 648 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 IFT81Q8WYA0 676 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 SEC14L1Q92503 715 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 LPGAT1Q92604 370 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 SH3KBP1Q96B97 665 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 CERS2Q96G23 380 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 SLC38A3Q99624 504 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 FOXP3Q9BZS1 431 aa14.52□□□□□ -0.09
TMEM248-204ENST00000424964 P2RY12Q9H244 342 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms