RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 ZNF570Q96NI8 536 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 MRPL57Q9BQC6 102 aaKnown RBP14.8□□□□□ -0.04
CALD1-206ENST00000424922 ZSCAN5AQ9BUG6 496 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 MRPL46Q9H2W6 279 aaKnown RBP14.8□□□□□ -0.04
CALD1-206ENST00000424922 FBRSQ9HAH7 460 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 FBXL12Q9NXK8 326 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 ZDHHC3Q9NYG2 299 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 NFKBIL1Q9UBC1 381 aaPredicted RBP14.8□□□□□ -0.04
CALD1-206ENST00000424922 GALPQ9UBC7 116 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 PRSS21Q9Y6M0 314 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 FADS2P1A8MWK0 482 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 CHRM3P20309 590 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 MXRA7P84157 204 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 SLC34A1Q06495 639 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 RCN1Q15293 331 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 EOGTQ5NDL2 527 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 TMEM92Q6UXU6 159 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 ARMCX6Q7L4S7 300 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 TRAM1L1Q8N609 369 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 COPS8Q99627 209 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 GPR21Q99679 349 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 THTPAQ9BU02 230 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 PCDHB1Q9Y5F3 818 aa14.8□□□□□ -0.04
CALD1-206ENST00000424922 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.8□□□□□ -0.04
CALD1-206ENST00000424922 E5RI56 91 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 H0Y3Z8 333 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 DLX3O60479 287 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 VPS26AO75436 327 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 KRT36O76013 467 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 PCDH8O95206 1070 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 WISP3O95389 354 aaPredicted RBP14.79□□□□□ -0.04
CALD1-206ENST00000424922 RPS3P23396 243 aaKnown RBP eCLIP14.79□□□□□ -0.04
CALD1-206ENST00000424922 ADSLP30566 484 aaPredicted RBP14.79□□□□□ -0.04
CALD1-206ENST00000424922 VHLP40337 213 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 ACTR3P61158 418 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 TAF11Q15544 211 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 SETMARQ53H47 684 aaPredicted RBP14.79□□□□□ -0.04
CALD1-206ENST00000424922 GPRC6AQ5T6X5 926 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 VWA5B1Q5TIE3 1220 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 PTRHD1Q6GMV3 140 aaKnown RBP14.79□□□□□ -0.04
CALD1-206ENST00000424922 Q6ZS52 159 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 CYP2U1Q7Z449 544 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 DTX3LQ8TDB6 740 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 ZNF483Q8TF39 744 aaPredicted RBP14.79□□□□□ -0.04
CALD1-206ENST00000424922 HEXDCQ8WVB3 486 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 NUS1Q96E22 293 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 CNDP1Q96KN2 507 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 UBXN10Q96LJ8 280 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 CCDC28BQ9BUN5 200 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 POPDC3Q9HBV1 291 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 SARS2Q9NP81 518 aaKnown RBP14.79□□□□□ -0.04
CALD1-206ENST00000424922 TCF7L2Q9NQB0 619 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 BATF3Q9NR55 127 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 IGSF5Q9NSI5 407 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 XPR1Q9UBH6 696 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 GNPTGQ9UJJ9 305 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 MMP17Q9ULZ9 603 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 COMMD10Q9Y6G5 202 aa14.79□□□□□ -0.04
CALD1-206ENST00000424922 TSPAN6O43657 245 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 AP1G1O43747 822 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 PYGLP06737 847 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 RPSAP08865 295 aaKnown RBP14.78□□□□□ -0.04
CALD1-206ENST00000424922 LTA4HP09960 611 aaKnown RBP14.78□□□□□ -0.04
CALD1-206ENST00000424922 ZNF37AP17032 561 aaPredicted RBP14.78□□□□□ -0.04
CALD1-206ENST00000424922 NSG1P42857 185 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 B4GALNT1Q00973 533 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 BTKQ06187 659 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 CCDC6Q16204 474 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 FAM83EQ2M2I3 478 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 SLC9B1Q4ZJI4 515 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 ARL13AQ5H913 290 aaPredicted RBP14.78□□□□□ -0.04
CALD1-206ENST00000424922 SEL1L3Q68CR1 1132 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 PAQR3Q6TCH7 311 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 RAVER1Q8IY67 606 aaKnown RBP14.78□□□□□ -0.04
CALD1-206ENST00000424922 PELI3Q8N2H9 469 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 SIDT2Q8NBJ9 832 aaKnown RBP14.78□□□□□ -0.04
CALD1-206ENST00000424922 KCNJ9Q92806 393 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 CCDC126Q96EE4 140 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 SIPA1Q96FS4 1042 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 SLC30A3Q99726 388 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 SMOXQ9NWM0 555 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 SLC7A8Q9UHI5 535 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 A0A088AWK7 358 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 IGLON5A6NGN9 336 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 CCNT2O60583 730 aaKnown RBP14.78□□□□□ -0.04
CALD1-206ENST00000424922 MTX2O75431 263 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 CHRNGP07510 517 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 ITGB6P18564 788 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 NCF2P19878 526 aaPredicted RBP14.78□□□□□ -0.04
CALD1-206ENST00000424922 ATP5F1P24539 256 aaPredicted RBP14.78□□□□□ -0.04
CALD1-206ENST00000424922 MPSTP25325 297 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 SLC26A3P40879 764 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 NAGLUP54802 743 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 KLF10Q13118 480 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 AGAP9Q5VTM2 703 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 PIWIL4Q7Z3Z4 852 aaKnown RBP14.78□□□□□ -0.04
CALD1-206ENST00000424922 MYLK4Q86YV6 388 aaPredicted RBP14.78□□□□□ -0.04
CALD1-206ENST00000424922 CPSF7Q8N684 471 aaKnown RBP14.78□□□□□ -0.04
CALD1-206ENST00000424922 FLCNQ8NFG4 579 aa14.78□□□□□ -0.04
CALD1-206ENST00000424922 MAPK15Q8TD08 544 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms