RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 CAPZA3Q96KX2 299 aa18.32■□□□□ 0.52
PRNP-202ENST00000424424 ZNF778Q96MU6 729 aa18.32■□□□□ 0.52
PRNP-202ENST00000424424 SLC46A1Q96NT5 459 aa18.32■□□□□ 0.52
PRNP-202ENST00000424424 CCM2Q9BSQ5 444 aa18.32■□□□□ 0.52
PRNP-202ENST00000424424 CHRAC1Q9NRG0 131 aa18.32■□□□□ 0.52
PRNP-202ENST00000424424 FAM8A1Q9UBU6 413 aa18.32■□□□□ 0.52
PRNP-202ENST00000424424 WDR37Q9Y2I8 494 aa18.32■□□□□ 0.52
PRNP-202ENST00000424424 IGHV5-10-1A0A0J9YXX1 117 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 TCRBV7S3A2A0A539 114 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 RRP8O43159 456 aaKnown RBP18.31■□□□□ 0.52
PRNP-202ENST00000424424 SGTAO43765 313 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 TNFSF15O95150 251 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 GSTM1P09488 218 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 SLC35G4P0C7Q5 338 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 AMD1P17707 334 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 MGAT1P26572 445 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 PAFAH1B1P43034 410 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 MAGEA6P43360 314 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 CRADDP78560 199 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 GSTM4Q03013 218 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 AARS2Q5JTZ9 985 aaKnown RBP18.31■□□□□ 0.52
PRNP-202ENST00000424424 ARMC3Q5W041 872 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 PACS1Q6VY07 963 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 ZNF574Q6ZN55 896 aaPredicted RBP18.31■□□□□ 0.52
PRNP-202ENST00000424424 LRRC69Q6ZNQ3 347 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 SNIP1Q8TAD8 396 aaKnown RBP18.31■□□□□ 0.52
PRNP-202ENST00000424424 NAT14Q8WUY8 206 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 SGSM3Q96HU1 749 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 CCDC74BQ96LY2 380 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 TBC1D10AQ9BXI6 508 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 WWP1Q9H0M0 922 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 MRM3Q9HC36 420 aaKnown RBP18.31■□□□□ 0.52
PRNP-202ENST00000424424 SLC40A1Q9NP59 571 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 LOXL2Q9Y4K0 774 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 ASPMQ8IZT6 3477 aa18.31■□□□□ 0.52
PRNP-202ENST00000424424 A0A1W2PNU3 283 aaPredicted RBP18.3■□□□□ 0.52
PRNP-202ENST00000424424 HGSO14964 777 aaPredicted RBP18.3■□□□□ 0.52
PRNP-202ENST00000424424 POLBP06746 335 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 ITGA2BP08514 1039 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 OR56A5P0C7T3 313 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 MLNP12872 115 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 HOXB3P14651 431 aaPredicted RBP18.3■□□□□ 0.52
PRNP-202ENST00000424424 CSF2RBP32927 897 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 PCBP4P57723 403 aaKnown RBP18.3■□□□□ 0.52
PRNP-202ENST00000424424 RPE65Q16518 533 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 KCTD19Q17RG1 926 aaPredicted RBP18.3■□□□□ 0.52
PRNP-202ENST00000424424 PLXDC1Q8IUK5 500 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 CLDN19Q8N6F1 224 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 CPT1BQ92523 772 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 CCDC97Q96F63 343 aaPredicted RBP18.3■□□□□ 0.52
PRNP-202ENST00000424424 PRR11Q96HE9 360 aaPredicted RBP18.3■□□□□ 0.52
PRNP-202ENST00000424424 C12orf66Q96MD2 445 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 RUNDC3BQ96NL0 473 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 DCBLD2Q96PD2 775 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 DDX47Q9H0S4 455 aaKnown RBP18.3■□□□□ 0.52
PRNP-202ENST00000424424 ASCL3Q9NQ33 180 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 CATSPERZQ9NTU4 200 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 IMP3Q9NV31 184 aaKnown RBP18.3■□□□□ 0.52
PRNP-202ENST00000424424 SYBUQ9NX95 663 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 RNF14Q9UBS8 474 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 NEU2Q9Y3R4 380 aa18.3■□□□□ 0.52
PRNP-202ENST00000424424 TLX3O43711 291 aaPredicted RBP18.29■□□□□ 0.52
PRNP-202ENST00000424424 UBXN7O94888 489 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 FTH1P02794 183 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 THRAP10827 490 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 MTHFD1P11586 935 aaKnown RBP18.29■□□□□ 0.52
PRNP-202ENST00000424424 CSTF2P33240 577 aaKnown RBP eCLIP18.29■□□□□ 0.52
PRNP-202ENST00000424424 CFHR1Q03591 330 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 GPR18Q14330 331 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 KRT33BQ14525 404 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 CASC4Q6P4E1 433 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 MICALCLQ6ZW33 695 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 ZNF534Q76KX8 674 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 RCBTB1Q8NDN9 531 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 ZNF248Q8NDW4 579 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 MCUQ8NE86 351 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 KIFC1Q9BW19 673 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 COG4Q9H9E3 785 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 XAB2Q9HCS7 855 aaKnown RBP18.29■□□□□ 0.52
PRNP-202ENST00000424424 KCND1Q9NSA2 647 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 TREX1Q9NSU2 369 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 SAMD15Q9P1V8 674 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 PISDQ9UG56 409 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 PCYOX1Q9UHG3 505 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 SOX13Q9UN79 622 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 HEBP2Q9Y5Z4 205 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 COLEC10Q9Y6Z7 277 aa18.29■□□□□ 0.52
PRNP-202ENST00000424424 MAGEB16A2A368 324 aa18.28■□□□□ 0.52
PRNP-202ENST00000424424 AGRPO00253 132 aa18.28■□□□□ 0.52
PRNP-202ENST00000424424 CD3EAPO15446 510 aaKnown RBP18.28■□□□□ 0.52
PRNP-202ENST00000424424 PAMP19021 973 aa18.28■□□□□ 0.52
PRNP-202ENST00000424424 MPSTP25325 297 aa18.28■□□□□ 0.52
PRNP-202ENST00000424424 NMBRP28336 390 aa18.28■□□□□ 0.52
PRNP-202ENST00000424424 EIF2S3P41091 472 aaKnown RBP18.28■□□□□ 0.52
PRNP-202ENST00000424424 TTPAP49638 278 aa18.28■□□□□ 0.52
PRNP-202ENST00000424424 RPA4Q13156 261 aa18.28■□□□□ 0.52
PRNP-202ENST00000424424 C16orf72Q14CZ0 275 aa18.28■□□□□ 0.52
PRNP-202ENST00000424424 PLCL1Q15111 1095 aa18.28■□□□□ 0.52
PRNP-202ENST00000424424 SNAP47Q5SQN1 464 aa18.28■□□□□ 0.52
PRNP-202ENST00000424424 ANKRD22Q5VYY1 191 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms