RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 VCLP18206 1134 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 ITGALP20701 1170 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 HADHAP40939 763 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 CAPZBP47756 277 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 PPM1FP49593 454 aaPredicted RBP15.15■□□□□ 0.02
SPC24-201ENST00000423327 SNX1Q13596 522 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 SEPT6Q14141 434 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 RPS6KA1Q15418 735 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 CCDC38Q502W7 563 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 KIAA1614Q5VZ46 1190 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 METRNLQ641Q3 311 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 SPDYE1Q8NFV5 336 aaPredicted RBP15.15■□□□□ 0.02
SPC24-201ENST00000423327 OR2L2Q8NH16 312 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 CXorf40BQ96DE9 158 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 C9orf72Q96LT7 481 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 INSM2Q96T92 566 aaPredicted RBP15.15■□□□□ 0.02
SPC24-201ENST00000423327 CTRCQ99895 268 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 DDA1Q9BW61 102 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 FRMD8P1Q9BZ68 369 aaPredicted RBP15.15■□□□□ 0.02
SPC24-201ENST00000423327 SPRY4Q9C004 299 aa15.15■□□□□ 0.02
SPC24-201ENST00000423327 KALRNO60229 2985 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 CAPN5O15484 640 aaPredicted RBP15.14■□□□□ 0.01
SPC24-201ENST00000423327 KIF1CO43896 1103 aaKnown RBP15.14■□□□□ 0.01
SPC24-201ENST00000423327 SUN1O94901 812 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 ZSCAN5DPP0CG00 497 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 MTHFD1P11586 935 aaKnown RBP15.14■□□□□ 0.01
SPC24-201ENST00000423327 ACRV1P26436 265 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 CD82P27701 267 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 STIP1P31948 543 aaKnown RBP15.14■□□□□ 0.01
SPC24-201ENST00000423327 MC2RQ01718 297 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 SEMA5AQ13591 1074 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 CCDC81Q6ZN84 652 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 SERPINA9Q86WD7 417 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 RBM12BQ8IXT5 1001 aaKnown RBP15.14■□□□□ 0.01
SPC24-201ENST00000423327 OR13J1Q8NGT2 312 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 STYXQ8WUJ0 223 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 ULK4Q96C45 1275 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 CDKN2AIPNLQ96HQ2 116 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 ZNF514Q96K75 400 aaPredicted RBP15.14■□□□□ 0.01
SPC24-201ENST00000423327 RMDN2Q96LZ7 410 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 TGM7Q96PF1 710 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 COPS8Q99627 209 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 WWP1Q9H0M0 922 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 SLC39A1Q9NY26 324 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 ZDHHC3Q9NYG2 299 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 FAM8A1Q9UBU6 413 aa15.14■□□□□ 0.01
SPC24-201ENST00000423327 STMND1H3BQB6 276 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 ATP1B2P14415 290 aaPredicted RBP15.13■□□□□ 0.01
SPC24-201ENST00000423327 FOXN2P32314 431 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 FDFT1P37268 417 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 HALP42357 657 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 DBN1Q16643 649 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 ZRANB3Q5FWF4 1079 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 PLXDC1Q8IUK5 500 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 SLC39A7Q92504 469 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 NKD1Q969G9 470 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 ZNF778Q96MU6 729 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 ALS2CR12Q96Q35 445 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 IMP3Q9NV31 184 aaKnown RBP15.13■□□□□ 0.01
SPC24-201ENST00000423327 SLC2A6Q9UGQ3 507 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 ZNF148Q9UQR1 794 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 PPP2R2CQ9Y2T4 447 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 PRSS21Q9Y6M0 314 aa15.13■□□□□ 0.01
SPC24-201ENST00000423327 CFAP46Q8IYW2 2715 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 ERI2A8K979 691 aaKnown RBP15.12■□□□□ 0.01
SPC24-201ENST00000423327 ERVH48-1M5A8F1 160 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 PSMD3O43242 534 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 AMD1P17707 334 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 RPL22P35268 128 aaKnown RBP15.12■□□□□ 0.01
SPC24-201ENST00000423327 RAB15P59190 212 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 SH3BP2P78314 561 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 RHDQ02161 417 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 CDH17Q12864 832 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 GPR33Q49SQ1 333 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 TMEM164Q5U3C3 297 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 CAPRIN2Q6IMN6 1127 aaKnown RBP15.12■□□□□ 0.01
SPC24-201ENST00000423327 DRICH1Q6PGQ1 229 aaPredicted RBP15.12■□□□□ 0.01
SPC24-201ENST00000423327 PRSS42Q7Z5A4 293 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 HM13Q8TCT9 377 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 UBE2Q2Q8WVN8 375 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 LRRC45Q96CN5 670 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 RNF31Q96EP0 1072 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 C12orf66Q96MD2 445 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 NRTNQ99748 197 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 SEMA4CQ9C0C4 833 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 ZNF768Q9H5H4 540 aaKnown RBP15.12■□□□□ 0.01
SPC24-201ENST00000423327 CASS4Q9NQ75 786 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 RAB6BQ9NRW1 208 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 WDR70Q9NW82 654 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 EPHA6Q9UF33 1036 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 PILRAQ9UKJ1 303 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 PCDHGA4Q9Y5G9 962 aa15.12■□□□□ 0.01
SPC24-201ENST00000423327 CCDC162PA2VCL2 907 aa15.11■□□□□ 0.01
SPC24-201ENST00000423327 DLGAP3O95886 979 aa15.11■□□□□ 0.01
SPC24-201ENST00000423327 FGGP02679 453 aa15.11■□□□□ 0.01
SPC24-201ENST00000423327 CXCR5P32302 372 aa15.11■□□□□ 0.01
SPC24-201ENST00000423327 SEPHS1P49903 392 aa15.11■□□□□ 0.01
SPC24-201ENST00000423327 CACNG1Q06432 222 aa15.11■□□□□ 0.01
SPC24-201ENST00000423327 COL9A2Q14055 689 aaPredicted RBP15.11■□□□□ 0.01
SPC24-201ENST00000423327 CCNG2Q16589 344 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms