RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 MPPE1Q53F39 396 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 ZNF776Q68DI1 518 aaPredicted RBP4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 TAX1BP1Q86VP1 789 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 IQCHQ86VS3 1027 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 CACUL1Q86Y37 369 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 TMTC1Q8IUR5 882 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 ARHGAP18Q8N392 663 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 EID2Q8N6I1 236 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 ZNF248Q8NDW4 579 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 OR2T34Q8NGX1 318 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 GOLGA5Q8TBA6 731 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 DDI1Q8WTU0 396 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 ASB12Q8WXK4 309 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 SKA1Q96BD8 255 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 ZDHHC12Q96GR4 267 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 MARS2Q96GW9 593 aaKnown RBP4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 ZNF578Q96N58 590 aaPredicted RBP4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 MED15Q96RN5 788 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 PANK2Q9BZ23 570 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 TRIM5Q9C035 493 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 TTYH3Q9C0H2 523 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 TWSG1Q9GZX9 223 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 CLMPQ9H6B4 373 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 APOBEC3GQ9HC16 384 aaKnown RBP4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 GDF3Q9NR23 364 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 ABCB8Q9NUT2 735 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 KIF17Q9P2E2 1029 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 LPAR3Q9UBY5 353 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 SERGEFQ9UGK8 458 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 SUN2Q9UH99 717 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 VPS51Q9UID3 782 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 RASAL2Q9UJF2 1139 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 FBXO9Q9UK97 447 aaPredicted RBP4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 FZD4Q9ULV1 537 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 PLA2G4CQ9UP65 541 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 SMC3Q9UQE7 1217 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 CRYL1Q9Y2S2 319 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 TMEM98Q9Y2Y6 226 aa4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 HBS1LQ9Y450 684 aaKnown RBP4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 UTP20O75691 2785 aaKnown RBP4.73□□□□□ -1.65
CDC42EP3-202ENST00000422687 ITIH6Q6UXX5 1313 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 SPTAN1Q13813 2472 aaKnown RBP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 NBPF19A0A087WUL8 3843 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 PVALEFA0A1B0GWK0 134 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 TARSL2A2RTX5 802 aaKnown RBP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 LRRC72A6NJI9 287 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 MAPK13O15264 365 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 PIAS2O75928 621 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 ACTL6BO94805 426 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 SUN1O94901 812 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 RHOBTB3O94955 611 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 MT-CO3P00414 261 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 IGLV3-27P01718 113 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 HLA-DRAP01903 254 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 ATP5BP06576 529 aaKnown RBP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 HMBSP08397 361 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 GIMD1P0DJR0 217 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 PPIFP30405 207 aaKnown RBP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 CD70P32970 193 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 NUDT1P36639 197 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 ARRB1P49407 418 aaPredicted RBP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 SGSHP51688 502 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 GEMIN4P57678 1058 aaKnown RBP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 TMPRSS3P57727 454 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 ERVPABLB-1P60509 514 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 YWHAGP61981 247 aaKnown RBP eCLIP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 CXADRP78310 365 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 ASIC1P78348 528 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 E2F1Q01094 437 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 SRSF1Q07955 248 aaKnown RBP eCLIP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 CCDC173Q0VFZ6 552 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 OVGP1Q12889 678 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 ATP1A4Q13733 1029 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 CST6Q15828 149 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 C9orf64Q5T6V5 341 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 ARHGAP17Q68EM7 881 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 SPOPLQ6IQ16 392 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 MSANTD2Q6P1R3 559 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 FAM173BQ6P4H8 233 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 NCEH1Q6PIU2 408 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 CHST9Q7L1S5 443 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 CPOQ8IVL8 374 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 SLC44A2Q8IWA5 706 aaPredicted RBP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 DHX40Q8IX18 779 aaKnown RBP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 NELFCDQ8IXH7 590 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 LSMEM2Q8N112 164 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 SCML4Q8N228 414 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 PDILTQ8N807 584 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 ZNF366Q8N895 744 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 ZNF557Q8N988 423 aaPredicted RBP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 LINC00301Q8NCQ3 95 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 FIBINQ8TAL6 211 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 WFDC5Q8TCV5 224 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 ZNF483Q8TF39 744 aaPredicted RBP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 AZIN2Q96A70 460 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 MIEF2Q96C03 454 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 SDCCAG3Q96C92 435 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 TMA16Q96EY4 203 aaKnown RBP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 MED8Q96G25 268 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 OR14A2Q96R54 314 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms