RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 PRR23CQ6ZRP0 262 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 SLITRK4Q8IW52 837 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 FERD3LQ96RJ6 166 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 TSPAN18Q96SJ8 248 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 EBPLQ9BY08 206 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 LRRC42Q9Y546 428 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 CHRNB2P17787 502 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 FUT4P22083 530 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 ZNF517Q6ZMY9 492 aaPredicted RBP12.21□□□□□ -0.45
CLCN4-203ENST00000421085 NCCRP1Q6ZVX7 275 aaPredicted RBP12.21□□□□□ -0.45
CLCN4-203ENST00000421085 CHST4Q8NCG5 386 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 CSGALNACT1Q8TDX6 532 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 AP2M1Q96CW1 435 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 ELAC1Q9H777 363 aaKnown RBP12.21□□□□□ -0.45
CLCN4-203ENST00000421085 GPSM3Q9Y4H4 160 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 URADA6NGE7 173 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 AQP12BA6NM10 295 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 MAGEB17A8MXT2 336 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 MSI1O43347 362 aaKnown RBP12.21□□□□□ -0.46
CLCN4-203ENST00000421085 GADD45GO95257 159 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 ZNF132P52740 706 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 PITPNAQ00169 270 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 ADNP2Q6IQ32 1131 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 XKR5Q6UX68 686 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 AQP12AQ8IXF9 295 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 CFAP52Q8N1V2 620 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 CENPSQ8N2Z9 138 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 SMG8Q8ND04 991 aaKnown RBP12.21□□□□□ -0.46
CLCN4-203ENST00000421085 ADAMTS15Q8TE58 950 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 RNF31Q96EP0 1072 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 TMEM106CQ9BVX2 250 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 KCTD5Q9NXV2 234 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 TVP23BQ9NYZ1 205 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 ZNF214Q9UL59 606 aaPredicted RBP12.21□□□□□ -0.46
CLCN4-203ENST00000421085 ITSN1Q15811 1721 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 MEGF6O75095 1541 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 IQCF5A8MTL0 148 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 CHP2O43745 196 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 HCN1O60741 890 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 NME6O75414 186 aaPredicted RBP12.21□□□□□ -0.46
CLCN4-203ENST00000421085 CST3P01034 146 aaPredicted RBP12.21□□□□□ -0.46
CLCN4-203ENST00000421085 SSR2P43308 183 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 FAM174BQ3ZCQ3 159 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 CAPN13Q6MZZ7 669 aaPredicted RBP12.21□□□□□ -0.46
CLCN4-203ENST00000421085 AHCYL2Q96HN2 611 aaKnown RBP12.21□□□□□ -0.46
CLCN4-203ENST00000421085 SLC27A5Q9Y2P5 690 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 PTCH2Q9Y6C5 1203 aa12.21□□□□□ -0.46
CLCN4-203ENST00000421085 ITGB1P05556 798 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 CDH1P12830 882 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 ZNF829Q3KNS6 432 aaPredicted RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 DRICH1Q6PGQ1 229 aaPredicted RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 PHC2Q8IXK0 858 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 GALNT12Q8IXK2 581 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 STON2Q8WXE9 905 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 SLC38A4Q969I6 547 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 RERGQ96A58 199 aaPredicted RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 CDADC1Q9BWV3 514 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 C1QTNF7Q9BXJ2 289 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 ABHD16BQ9H3Z7 469 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 UPB1Q9UBR1 384 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 EIF2B4Q9UI10 523 aaKnown RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 WTIPA6NIX2 430 aaPredicted RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 RIIAD1A6NNX1 92 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 ISM1B1AKI9 464 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 HMGB3O15347 200 aaKnown RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 MAGEA2P43356 314 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 HADHBP55084 474 aaKnown RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 MOGQ16653 247 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 ASB18Q6ZVZ8 466 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 NEK7Q8TDX7 302 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 SUSD6Q92537 303 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 MYO19Q96H55 970 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 YTHDF1Q9BYJ9 559 aaKnown RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 APOC1P02654 83 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 RAVER1Q8IY67 606 aaKnown RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 PYROXD2Q8N2H3 581 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 STYXQ8WUJ0 223 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 SLC13A3Q8WWT9 602 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 GPER1Q99527 375 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 NECTIN3Q9NQS3 549 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 THG1LQ9NWX6 298 aaKnown RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 CFL2Q9Y281 166 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 OGNP20774 298 aaKnown RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 MAPK12P53778 367 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 SREBF2Q12772 1141 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 IFI44LQ53G44 452 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 GPR152Q8TDT2 470 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 DCAKDQ8WVC6 231 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 TTLL2Q9BWV7 592 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 PPRC1Q5VV67 1664 aaKnown RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 ISPDA4D126 451 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 RGL2O15211 777 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 CILPO75339 1184 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 RSL1D1O76021 490 aaKnown RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 CAMK1Q14012 370 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 IQCCQ4KMZ1 466 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 PACRGLQ8N7B6 248 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 LRRC52Q8N7C0 313 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 LPPQ93052 612 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 UROC1Q96N76 676 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms