RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 PDE7BQ9NP56 450 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 PCDHA13Q9Y5I0 950 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 C5orf60A6NFR6 353 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 MGAT4DA6NG13 374 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 C2orf81A6NN90 581 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 H7C0C1 242 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 ARHGAP6O43182 974 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 RECKO95980 971 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 AGTP01019 485 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 CCNYL3P0C7X3 344 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 MTHFD1P11586 935 aaKnown RBP16.98■□□□□ 0.31
MSH6-203ENST00000420813 MSH3P20585 1137 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 RBL1P28749 1068 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 CTNNA1P35221 906 aaKnown RBP16.98■□□□□ 0.31
MSH6-203ENST00000420813 ATP5OP48047 213 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 PLCL1Q15111 1095 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 TAF1AQ15573 450 aaPredicted RBP16.98■□□□□ 0.31
MSH6-203ENST00000420813 RANBP10Q6VN20 620 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 DAAM2Q86T65 1068 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 SIDT2Q8NBJ9 832 aaKnown RBP16.98■□□□□ 0.31
MSH6-203ENST00000420813 OR2L2Q8NH16 312 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 C19orf43Q9BQ61 176 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 GORASP1Q9BQQ3 440 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 FICDQ9BVA6 458 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 HEMGNQ9BXL5 484 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 LNPEPQ9UIQ6 1025 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 RARRES3Q9UL19 164 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 ACSL5Q9ULC5 683 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 PADI1Q9ULC6 663 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 PSMD13Q9UNM6 376 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 AAR2Q9Y312 384 aaKnown RBP16.98■□□□□ 0.31
MSH6-203ENST00000420813 PCDHGA6Q9Y5G7 932 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 MRPS18BQ9Y676 258 aaKnown RBP16.98■□□□□ 0.31
MSH6-203ENST00000420813 DOPEY2Q9Y3R5 2298 aa16.98■□□□□ 0.31
MSH6-203ENST00000420813 FLNCQ14315 2725 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 IGHV5-51A0A0C4DH38 117 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 TLCD2A6NGC4 264 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 PYGMP11217 842 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 PTPN7P35236 360 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 ADRA1AP35348 466 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 CYLC1P35663 651 aaPredicted RBP16.97■□□□□ 0.31
MSH6-203ENST00000420813 CASRP41180 1078 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 PPP1CAP62136 330 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 ACY1Q03154 408 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 TUBB3Q13509 450 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 BCL7AQ4VC05 210 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 FNBP1LQ5T0N5 605 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 ATP1A1-AS1Q5TC04 95 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 CCDC181Q5TID7 509 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 CDKL3Q8IVW4 592 aaPredicted RBP16.97■□□□□ 0.31
MSH6-203ENST00000420813 CARFQ8N187 725 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 OR4K2Q8NGD2 314 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 ACTL9Q8TC94 416 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 ABHD17AQ96GS6 310 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 ELMO2Q96JJ3 720 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 LINC00615Q96LM1 132 aaPredicted RBP16.97■□□□□ 0.31
MSH6-203ENST00000420813 PPP1R2P1Q96PQ5 205 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 TRIM5Q9C035 493 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 EPN3Q9H201 632 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 IMP3Q9NV31 184 aaKnown RBP16.97■□□□□ 0.31
MSH6-203ENST00000420813 TFR2Q9UP52 801 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 POLHQ9Y253 713 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 PCDHA3Q9Y5H8 950 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 ARL5AQ9Y689 179 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 KCNMB2Q9Y691 235 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 SPTBP11277 2137 aa16.97■□□□□ 0.31
MSH6-203ENST00000420813 OR5K3A6NET4 321 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 AGAP14A8MT82 685 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 C21orf140B9A014 251 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 PJA2O43164 708 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 ZNF189O75820 626 aaPredicted RBP16.96■□□□□ 0.31
MSH6-203ENST00000420813 SRP72O76094 671 aaKnown RBP16.96■□□□□ 0.31
MSH6-203ENST00000420813 PBLDP30039 288 aaPredicted RBP16.96■□□□□ 0.31
MSH6-203ENST00000420813 PDE1BQ01064 536 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 OTUD4Q01804 1114 aaKnown RBP16.96■□□□□ 0.31
MSH6-203ENST00000420813 DNASE1L3Q13609 305 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 PTPRCAPQ14761 206 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 SKIDA1Q1XH10 827 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 LACTB2Q53H82 288 aaPredicted RBP16.96■□□□□ 0.31
MSH6-203ENST00000420813 DNTTIP2Q5QJE6 756 aaKnown RBP16.96■□□□□ 0.31
MSH6-203ENST00000420813 OOSP2Q86WS3 158 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 INSM2Q96T92 566 aaPredicted RBP16.96■□□□□ 0.31
MSH6-203ENST00000420813 MAP3K3Q99759 626 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 OSBPL8Q9BZF1 889 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 WWP1Q9H0M0 922 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 ASB8Q9H765 288 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 LHX9Q9NQ69 397 aa16.96■□□□□ 0.31
MSH6-203ENST00000420813 ZNF71Q9NQZ8 489 aaPredicted RBP16.96■□□□□ 0.31
MSH6-203ENST00000420813 SEC16AO15027 2179 aa16.95■□□□□ 0.3
MSH6-203ENST00000420813 KATNA1O75449 491 aa16.95■□□□□ 0.3
MSH6-203ENST00000420813 STK10O94804 968 aaKnown RBP16.95■□□□□ 0.3
MSH6-203ENST00000420813 TIAF1O95411 115 aa16.95■□□□□ 0.3
MSH6-203ENST00000420813 CRTAMO95727 393 aa16.95■□□□□ 0.3
MSH6-203ENST00000420813 SLC35G4P0C7Q5 338 aa16.95■□□□□ 0.3
MSH6-203ENST00000420813 FOLR1P15328 257 aa16.95■□□□□ 0.3
MSH6-203ENST00000420813 PSMB4P28070 264 aa16.95■□□□□ 0.3
MSH6-203ENST00000420813 ERV3-1Q14264 604 aa16.95■□□□□ 0.3
MSH6-203ENST00000420813 PRPSAP1Q14558 356 aa16.95■□□□□ 0.3
MSH6-203ENST00000420813 ANKRD20A2Q5SQ80 823 aa16.95■□□□□ 0.3
MSH6-203ENST00000420813 ANKRD20A1Q5TYW2 823 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms