RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 GSTM1P09488 218 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 OR56A5P0C7T3 313 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 CTAGE8P0CG41 777 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 F3P13726 295 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 PGAM1P18669 254 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 ARNTP27540 789 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 HALP42357 657 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 GSTM4Q03013 218 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 DHX9Q08211 1270 aaKnown RBP13.1□□□□□ -0.31
TMEM248-203ENST00000418375 THOC5Q13769 683 aaKnown RBP13.1□□□□□ -0.31
TMEM248-203ENST00000418375 BBS9Q3SYG4 887 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 PERM1Q5SV97 790 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 AGAP9Q5VTM2 703 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 DUPD1Q68J44 220 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 IYDQ6PHW0 289 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 WASH2PQ6VEQ5 465 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 SLC9B2Q86UD5 537 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 CTAGE6Q86UF2 777 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 CCNJLQ8IV13 435 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 SFTPA2Q8IWL1 248 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 CTAGE4Q8IX94 777 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 SFRP1Q8N474 314 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 BEND7Q8N7W2 519 aaPredicted RBP13.1□□□□□ -0.31
TMEM248-203ENST00000418375 WDR48Q8TAF3 677 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 HM13Q8TCT9 377 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 SLC37A2Q8TED4 501 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 PATE1Q8WXA2 126 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 LRRC39Q96DD0 335 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 CCDC97Q96F63 343 aaPredicted RBP13.1□□□□□ -0.31
TMEM248-203ENST00000418375 EBNA1BP2Q99848 306 aaKnown RBP13.1□□□□□ -0.31
TMEM248-203ENST00000418375 CCDC3Q9BQI4 270 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 CCM2Q9BSQ5 444 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 WASH6PQ9NQA3 447 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 PRDM8Q9NQV8 689 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 RNF215Q9Y6U7 377 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 MYLKQ15746 1914 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 TRBV23OR9-2A0A075B6M9 112 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 C17orf113A0A1B0GUU1 675 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 PRR19A6NJB7 356 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 OPA1O60313 960 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 EML2O95834 649 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 FTH1P02794 183 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 ABCG1P45844 678 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 FASLGP48023 281 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 ARCN1P48444 511 aaKnown RBP13.09□□□□□ -0.31
TMEM248-203ENST00000418375 CAV1Q03135 178 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 NFE2L1Q14494 772 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 SEMA3AQ14563 771 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 SEPT7Q16181 437 aaKnown RBP13.09□□□□□ -0.31
TMEM248-203ENST00000418375 LONRF1Q17RB8 773 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 RNF187Q5TA31 235 aaPredicted RBP13.09□□□□□ -0.31
TMEM248-203ENST00000418375 METRNLQ641Q3 311 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 NEPROQ6NW34 567 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 ZNF449Q6P9G9 518 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 ABRAXAS1Q6UWZ7 409 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 LDB1Q86U70 411 aaPredicted RBP13.09□□□□□ -0.31
TMEM248-203ENST00000418375 TRIM48Q8IWZ4 208 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 AGGF1Q8N302 714 aaeCLIP13.09□□□□□ -0.31
TMEM248-203ENST00000418375 CLDN19Q8N6F1 224 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 CEP112Q8N8E3 955 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
TMEM248-203ENST00000418375 GPR150Q8NGU9 434 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 GABPB2Q8TAK5 448 aaPredicted RBP13.09□□□□□ -0.31
TMEM248-203ENST00000418375 NAT14Q8WUY8 206 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 SH3KBP1Q96B97 665 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 FCRL3Q96P31 734 aaPredicted RBP13.09□□□□□ -0.31
TMEM248-203ENST00000418375 TCF12Q99081 682 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 TSSK1BQ9BXA7 367 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 C20orf96Q9NUD7 363 aaPredicted RBP13.09□□□□□ -0.31
TMEM248-203ENST00000418375 MARCH4Q9P2E8 410 aaPredicted RBP13.09□□□□□ -0.31
TMEM248-203ENST00000418375 ACSL5Q9ULC5 683 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 FAM169AQ9Y6X4 670 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 KNTC1P50748 2209 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 URB1O60287 2271 aaKnown RBP13.09□□□□□ -0.31
TMEM248-203ENST00000418375 NBEAQ8NFP9 2946 aa13.09□□□□□ -0.31
TMEM248-203ENST00000418375 ZCWPW2A0A1B0GU75 182 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 PRMT5O14744 637 aaPredicted RBP13.08□□□□□ -0.32
TMEM248-203ENST00000418375 TLX3O43711 291 aaPredicted RBP13.08□□□□□ -0.32
TMEM248-203ENST00000418375 OR1I1O60431 355 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 OGNP20774 298 aaKnown RBP13.08□□□□□ -0.32
TMEM248-203ENST00000418375 RPL10P27635 214 aaKnown RBP13.08□□□□□ -0.32
TMEM248-203ENST00000418375 GPR3P46089 330 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 DRG2P55039 364 aaKnown RBP13.08□□□□□ -0.32
TMEM248-203ENST00000418375 HHEXQ03014 270 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 TYSND1Q2T9J0 566 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 MSS51Q4VC12 460 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 SPANXN3Q5MJ09 141 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 LRRC69Q6ZNQ3 347 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 FAM83HQ6ZRV2 1179 aaPredicted RBP13.08□□□□□ -0.32
TMEM248-203ENST00000418375 CENPUQ71F23 418 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 ZNF438Q7Z4V0 828 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 LRRC6Q86X45 466 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 LMNTD2Q8IXW0 634 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 CFAP206Q8IYR0 622 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 MMGT1Q8N4V1 131 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 Q8N9G6 341 aaPredicted RBP13.08□□□□□ -0.32
TMEM248-203ENST00000418375 CALML6Q8TD86 181 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 SLC38A3Q99624 504 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 TRIM56Q9BRZ2 755 aaKnown RBP13.08□□□□□ -0.32
TMEM248-203ENST00000418375 SYNDIG1Q9H7V2 258 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms