RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 YBEYP58557 167 aaPredicted RBP11.73□□□□□ -0.53
LIMK1-202ENST00000418310 ZNF177Q13360 481 aaPredicted RBP11.73□□□□□ -0.53
LIMK1-202ENST00000418310 BFSP2Q13515 415 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 TAF12Q16514 161 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 FAM174BQ3ZCQ3 159 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 OGFOD2Q6N063 350 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 SPESP1Q6UW49 350 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 SLC24A5Q71RS6 500 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 LYSMD3Q7Z3D4 306 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 GPR180Q86V85 440 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 CDC26Q8NHZ8 85 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 HM13Q8TCT9 377 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 LKAAEAR1Q8TD35 194 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 CIPCQ9C0C6 399 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 PDFQ9HBH1 243 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 SLC52A3Q9NQ40 469 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 LATS2Q9NRM7 1088 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 RIC8BQ9NVN3 520 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 VAPAQ9P0L0 249 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 DOCK4Q8N1I0 1966 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 TCRBV5S2A0A599 114 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 DRGXA6NNA5 263 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 H3BMQ9 156 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 ARVCFO00192 962 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 GMNNO75496 209 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 ATF6P18850 670 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 ACVR1Q04771 509 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 TYSND1Q2T9J0 566 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 LRRC73Q5JTD7 316 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 INTS11Q5TA45 600 aaKnown RBP11.73□□□□□ -0.53
LIMK1-202ENST00000418310 GCNT7Q6ZNI0 430 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 GOLGA7Q7Z5G4 137 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 GALNT10Q86SR1 603 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 NKAPQ8N5F7 415 aaKnown RBP11.73□□□□□ -0.53
LIMK1-202ENST00000418310 COG8Q96MW5 612 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 SEZ6LQ9BYH1 1024 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 IKZF5Q9H5V7 419 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 TIMMDC1Q9NPL8 285 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 PFDN4Q9NQP4 134 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 PADI4Q9UM07 663 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 GREB1Q4ZG55 1949 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 A0A1W2PQ67 120 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 ANKRD66B4E2M5 251 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 CAPN15O75808 1086 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 LRATO95237 230 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 GPIP06744 558 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 EFNA1P20827 205 aaPredicted RBP11.73□□□□□ -0.53
LIMK1-202ENST00000418310 ATP5C1P36542 298 aaKnown RBP11.73□□□□□ -0.53
LIMK1-202ENST00000418310 CCR3P51677 355 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 ZBED5Q49AG3 693 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 RASAL3Q86YV0 1011 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 TNIP2Q8NFZ5 429 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 STON2Q8WXE9 905 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 MGME1Q9BQP7 344 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 CIDEBQ9UHD4 219 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 PKP3Q9Y446 797 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 BOLA2-SMG1P6H3BVE0 249 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 ADAMTS4O75173 837 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 E2F6O75461 281 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 MLYCDO95822 493 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 SUOXP51687 545 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 NAA20P61599 178 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 LSM3P62310 102 aaKnown RBP11.72□□□□□ -0.53
LIMK1-202ENST00000418310 CAP1Q01518 475 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 TAF1AQ15573 450 aaPredicted RBP11.72□□□□□ -0.53
LIMK1-202ENST00000418310 BORAQ6PGQ7 559 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 IFNL1Q8IU54 200 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 ZC3H7AQ8IWR0 971 aaKnown RBP11.72□□□□□ -0.53
LIMK1-202ENST00000418310 MFSD2AQ8NA29 543 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 GPR150Q8NGU9 434 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 FUBP3Q96I24 572 aaKnown RBP eCLIP11.72□□□□□ -0.53
LIMK1-202ENST00000418310 PSKH2Q96QS6 385 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 INTS10Q9NVR2 710 aaKnown RBP11.72□□□□□ -0.53
LIMK1-202ENST00000418310 DNAAF2Q9NVR5 837 aaKnown RBP11.72□□□□□ -0.53
LIMK1-202ENST00000418310 VPS4AQ9UN37 437 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 H0YJX3 145 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 SEPT4O43236 478 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 NOL3O60936 208 aaKnown RBP11.72□□□□□ -0.53
LIMK1-202ENST00000418310 EEDO75530 441 aaKnown RBP11.72□□□□□ -0.53
LIMK1-202ENST00000418310 BMP10O95393 424 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 CYP4B1P13584 511 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 MATN1P21941 496 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 ALDH4A1P30038 563 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 SLC11A2P49281 568 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 RHOAP61586 193 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 PLD1Q13393 1074 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 CPSF6Q16630 551 aaKnown RBP eCLIP11.72□□□□□ -0.53
LIMK1-202ENST00000418310 MEP1AQ16819 746 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 SPANXN4Q5MJ08 99 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 SPATA19Q7Z5L4 167 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 GALNT5Q7Z7M9 940 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 TBC1D21Q8IYX1 336 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 FAM162AQ96A26 154 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 TADA1Q96BN2 335 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 CGREF1Q99674 301 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 BDH2Q9BUT1 245 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 LRRC3Q9BY71 257 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 WWOXQ9NZC7 414 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 INVSQ9Y283 1065 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 NLRC5Q86WI3 1866 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms