RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 SLC22A17Q8WUG5 538 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 SGCDQ92629 289 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 ACSS2Q9NR19 701 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 MAGEL2Q9UJ55 1249 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 SNX10Q9Y5X0 201 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 SAP18O00422 153 aaKnown RBP11.09□□□□□ -0.63
PTCH1-205ENST00000418258 ZNF8P17098 575 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-205ENST00000418258 ATP5A1P25705 553 aaKnown RBP11.09□□□□□ -0.63
PTCH1-205ENST00000418258 LILRA4P59901 499 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 MPP1Q00013 466 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 DLG1Q12959 904 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 ZMYND11Q15326 602 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 SLC22A15Q8IZD6 547 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 TWIST2Q8WVJ9 160 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 MAGEH1Q9H213 219 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 PDP1Q9P0J1 537 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-205ENST00000418258 ING4Q9UNL4 249 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 ARHGEF33A8MVX0 844 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 FADS2P1A8MWK0 482 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 VSTM5A8MXK1 200 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 GDI2P50395 445 aaKnown RBP11.09□□□□□ -0.63
PTCH1-205ENST00000418258 TMEM192Q8IY95 271 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 FAM110BQ8TC76 370 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 IPPKQ9H8X2 491 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 PNPOQ9NVS9 261 aa11.09□□□□□ -0.63
PTCH1-205ENST00000418258 MSX2P35548 267 aaPredicted RBP11.08□□□□□ -0.63
PTCH1-205ENST00000418258 TLR1Q15399 786 aa11.08□□□□□ -0.63
PTCH1-205ENST00000418258 PDK4Q16654 411 aa11.08□□□□□ -0.63
PTCH1-205ENST00000418258 DEFB119Q8N690 84 aa11.08□□□□□ -0.63
PTCH1-205ENST00000418258 GPR151Q8TDV0 419 aa11.08□□□□□ -0.63
PTCH1-205ENST00000418258 DGAT2Q96PD7 388 aa11.08□□□□□ -0.63
PTCH1-205ENST00000418258 NDC1Q9BTX1 674 aa11.08□□□□□ -0.63
PTCH1-205ENST00000418258 PARP4Q9UKK3 1724 aaKnown RBP11.08□□□□□ -0.63
PTCH1-205ENST00000418258 FMN2Q9NZ56 1722 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 LYPLA1O75608 230 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 FADS2O95864 444 aaKnown RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CST3P01034 146 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 HTR7P34969 479 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 YBEYP58557 167 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CRY2Q49AN0 593 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 SLC26A9Q7LBE3 791 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ZNF527Q8NB42 609 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 FAM46DQ8NEK8 389 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 HOPXQ9BPY8 73 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ADAM7Q9H2U9 754 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 DPEP3Q9H4B8 488 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 MGAT4AQ9UM21 535 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 KMOO15229 486 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 GOT2P00505 430 aaKnown RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ICAM3P32942 547 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 RPS6KA3P51812 740 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 NDST2P52849 883 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CEBPGP53567 150 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 RABGGTBP53611 331 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 SEMG2Q02383 582 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 RASGEF1BQ0VAM2 473 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 GK5Q6ZS86 529 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ZSCAN1Q8NBB4 408 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 TSEN2Q8NCE0 465 aaKnown RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 PIGXQ8TBF5 258 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 PWWP2AQ96N64 755 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 NRP2O60462 931 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ZNF432O94892 652 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 C8GP07360 202 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 PRMT2P55345 433 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ECT2LQ008S8 904 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ILDR1Q86SU0 546 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CHERPQ8IWX8 916 aaKnown RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 C2orf15Q8WU43 125 aaKnown RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 RASSF5Q8WWW0 418 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ART4Q93070 314 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 NXNL1Q96CM4 212 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ART5Q96L15 291 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CST11Q9H112 138 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 PEX12O00623 359 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 UGT2B11O75310 529 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CDK9P50750 372 aaKnown RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 PTPN20Q4JDL3 420 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 MTX3Q5HYI7 312 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 FAM131AQ6UXB0 335 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ANKRD46Q86W74 232 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CROCCP3Q8IVE0 287 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CPSF7Q8N684 471 aaKnown RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 TBATAQ96M53 351 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 HSD17B14Q9BPX1 270 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CHRAC1Q9NRG0 131 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 NUDT4Q9NZJ9 180 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 RGPD8O14715 1765 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 BBIP1A8MTZ0 92 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 LOC110117498-PIK3R3F6TDL0 507 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 AP5Z1O43299 807 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CILPO75339 1184 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 GATBO75879 557 aaKnown RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 NOL4O94818 638 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ADH5P11766 374 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CCNCP24863 283 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CCR10P46092 362 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ATG14Q6ZNE5 492 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 SLC29A4Q7RTT9 530 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 MMAAQ8IVH4 418 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms