RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 HTR2BP41595 481 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 KCNC1P48547 511 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 NKG7Q16617 165 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 LRRC26Q2I0M4 334 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 LAIR1Q6GTX8 287 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 SPATA19Q7Z5L4 167 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 GLRX5Q86SX6 157 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 NOXA1Q86UR1 476 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 OR5H6Q8NGV6 325 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PYCR2Q96C36 320 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PDLIM5Q96HC4 596 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 C12orf42Q96LP6 360 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 TEKT5Q96M29 485 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 VAT1Q99536 393 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 GON7Q9BXV9 100 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 ALG9Q9H6U8 611 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 AIG1Q9NVV5 245 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 WDR70Q9NW82 654 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 RAPGEFL1Q9UHV5 662 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 SNX6Q9UNH7 406 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 INVSQ9Y283 1065 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 IGKV6D-21A0A0A0MT36 114 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PNMA8CA0A1B0GUJ8 204 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 GNGT2O14610 69 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 SHOXO15266 292 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PRR35P0CG20 571 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 NPR1P16066 1061 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 ERCC2P18074 760 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 FMO4P31512 558 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 DCTP40126 519 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 SULT1E1P49888 294 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 POLR2JP52435 117 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 LAPTM5Q13571 262 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 SUZ12Q15022 739 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 IER5Q5VY09 327 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 ZNF517Q6ZMY9 492 aaPredicted RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 KLHDC8BQ8IXV7 354 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 EID3Q8N140 333 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 C7orf31Q8N865 590 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC43A3Q8NBI5 491 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 OR5K1Q8NHB7 308 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PIK3R3Q92569 461 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PHOX2BQ99453 314 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 RHNO1Q9BSD3 238 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 CENPOQ9BU64 300 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 DIABLOQ9NR28 239 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 RNF146Q9NTX7 359 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 CCDC59Q9P031 241 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 BTBD3Q9Y2F9 522 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 ORC6Q9Y5N6 252 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 HSPE1-MOB4S4R3N1 261 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 HMX3A6NHT5 357 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 FADS2P1A8MWK0 482 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC22A3O75751 556 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PGLSO95336 258 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 LCKP06239 509 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 DBTP11182 482 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 LCP1P13796 627 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PRKACGP22612 351 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC15A1P46059 708 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 UFM1P61960 85 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 TARDBPQ13148 414 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PARP15Q460N3 678 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 BCL7AQ4VC05 210 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 CYP20A1Q6UW02 462 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 ENPP6Q6UWR7 440 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 NECAB2Q7Z6G3 386 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 TMEM179BQ7Z7N9 219 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 ISCA2Q86U28 154 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 AADATQ8N5Z0 425 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 ZNF540Q8NDQ6 660 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PPHLN1Q8NEY8 458 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 TSPAN17Q96FV3 270 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 CCDC115Q96NT0 180 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 KCNA7Q96RP8 456 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 SDHCQ99643 169 aaPredicted RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 ITPAQ9BY32 194 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 BRINP2Q9C0B6 783 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 GORASP2Q9H8Y8 452 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PLEKHA5Q9HAU0 1116 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 NRBP2Q9NSY0 501 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 TOR4AQ9NXH8 423 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC2A6Q9UGQ3 507 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 EVLQ9UI08 416 aaPredicted RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 DNMT3LQ9UJW3 386 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 BTRCQ9Y297 605 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 RIPK3Q9Y572 518 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PEX16Q9Y5Y5 336 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 KRT87PA6NCN2 255 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 GRXCR2A6NFK2 248 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 H3BQ06 376 aaPredicted RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PSMD3O43242 534 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 TMCC2O75069 709 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 STAU1O95793 577 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 TMEM132AQ24JP5 1023 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 OTUD1Q5VV17 481 aaPredicted RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 CAPN13Q6MZZ7 669 aaPredicted RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 TRAF7Q6Q0C0 670 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 NRARPQ7Z6K4 114 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 DPP10Q8N608 796 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms