RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 CNIH3Q8TBE1 160 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 STYXQ8WUJ0 223 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 LRRC58Q96CX6 371 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 OPALINQ96PE5 141 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 RNF157Q96PX1 679 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 FAM213AQ9BRX8 229 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 AMNQ9BXJ7 453 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 HDHD5Q9BXW7 423 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 WDR11Q9BZH6 1224 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 FANCFQ9NPI8 374 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 ACOT13Q9NPJ3 140 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 PIH1D1Q9NWS0 290 aaKnown RBP6.32□□□□□ -1.4
CCNT1-202ENST00000417344 ERVK13-1Q9NX77 482 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 CPNE7Q9UBL6 633 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 SLC23A1Q9UHI7 598 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 KLHL21Q9UJP4 597 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 TLR6Q9Y2C9 796 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 KLHL20Q9Y2M5 609 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 NDUFAF1Q9Y375 327 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 TPRKBQ9Y3C4 175 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 LYVE1Q9Y5Y7 322 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 A0A0J9YYE9 177 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 A0A1W2PRG6 482 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 FAM92AA1XBS5 289 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 SLC35F4A4IF30 521 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 POLRMTO00411 1230 aaKnown RBP6.31□□□□□ -1.4
CCNT1-202ENST00000417344 NOBOXO60393 691 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 DLX3O60479 287 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 KATNA1O75449 491 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 PPM1BO75688 479 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 SLC22A5O76082 557 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 C1QBP02746 253 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 HMGCRP04035 888 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 TP53P04637 393 aaPredicted RBP6.31□□□□□ -1.4
CCNT1-202ENST00000417344 ITGB3P05106 788 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 ALPPP05187 535 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 F7P08709 466 aaPredicted RBP6.31□□□□□ -1.4
CCNT1-202ENST00000417344 CLEC2LP0C7M8 214 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 RHOQP17081 205 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 ITGB6P18564 788 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 TNNI3P19429 210 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 RARRES1P49788 294 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 GSK3BP49841 420 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 ARHGDIAP52565 204 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 YBX1P67809 324 aaKnown RBP6.31□□□□□ -1.4
CCNT1-202ENST00000417344 SLC35A2P78381 396 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 PTSQ03393 145 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 FOXM1Q08050 763 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 ZMYND11Q15326 602 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 PSMD5Q16401 504 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 VPS26BQ4G0F5 336 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 PTPN20Q4JDL3 420 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 ATF7IP2Q5U623 682 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 TYW3Q6IPR3 259 aaKnown RBP6.31□□□□□ -1.4
CCNT1-202ENST00000417344 SLC39A4Q6P5W5 647 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 CNSTQ6PJW8 725 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 CES3Q6UWW8 571 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 CCDC190Q86UF4 302 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 TMEM151BQ8IW70 566 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 PHC2Q8IXK0 858 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 SAMD14Q8IZD0 417 aaPredicted RBP6.31□□□□□ -1.4
CCNT1-202ENST00000417344 OR8H2Q8N162 312 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 TXNDC5Q8NBS9 432 aaKnown RBP6.31□□□□□ -1.4
CCNT1-202ENST00000417344 ZBTB44Q8NCP5 570 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 FBLIM1Q8WUP2 373 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 DNAJA4Q8WW22 397 aaPredicted RBP6.31□□□□□ -1.4
CCNT1-202ENST00000417344 PIGBQ92521 554 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 SLC38A4Q969I6 547 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 MAGEB10Q96LZ2 347 aaPredicted RBP6.31□□□□□ -1.4
CCNT1-202ENST00000417344 TRNT1Q96Q11 434 aaKnown RBP6.31□□□□□ -1.4
CCNT1-202ENST00000417344 PEBP4Q96S96 227 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 SECISBP2Q96T21 854 aaKnown RBP6.31□□□□□ -1.4
CCNT1-202ENST00000417344 C1QTNF1Q9BXJ1 281 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 CEP41Q9BYV8 373 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 MMP28Q9H239 520 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 CRISPLD1Q9H336 500 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 DUSP21Q9H596 190 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 SMURF2Q9HAU4 748 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 LRRC4Q9HBW1 653 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 TMEM39AQ9NV64 488 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 EXD2Q9NVH0 621 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 TAS2R7Q9NYW3 318 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF224Q9NZL3 707 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 SRP68Q9UHB9 627 aaKnown RBP6.31□□□□□ -1.4
CCNT1-202ENST00000417344 ADGRE2Q9UHX3 823 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 TLK1Q9UKI8 766 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 FZD1Q9UP38 647 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 TRAPPC4Q9Y296 219 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 DAGLAQ9Y4D2 1042 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 HSPB11Q9Y547 144 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 PCDHA9Q9Y5H5 950 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 HSPE1-MOB4S4R3N1 261 aa6.31□□□□□ -1.4
CCNT1-202ENST00000417344 A0A0U1RQS6 177 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 OR2A25A4D2G3 310 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 CCDC182A6NF36 153 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TARM1B6A8C7 271 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 RGS5O15539 181 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF623O75123 536 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TULP3O75386 442 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 OR5F1O95221 314 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms