RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 CLDN9O95484 217 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 GPIP06744 558 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 ZNF10P21506 573 aaPredicted RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 RPL9P32969 192 aaKnown RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 FAUP35544 74 aaKnown RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 RORCP51449 518 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 TMEM236Q5W0B7 351 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 SLC30A6Q6NXT4 461 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 FAM83AQ86UY5 434 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 C12orf50Q8NA57 414 aaPredicted RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 HMCESQ96FZ2 354 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 NMUR1Q9HB89 426 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 ITM2CQ9NQX7 267 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 AASDHPPTQ9NRN7 309 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 TCAF1Q9Y4C2 921 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 C9IYK1 514 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 PEX10O60683 326 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 DDNO94850 711 aaPredicted RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 ARFIP1P53367 373 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 GJA9P57773 515 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 GAD2Q05329 585 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 ATP13A5Q4VNC0 1218 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 XKR5Q6UX68 686 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 CANT1Q8WVQ1 401 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 RERGQ96A58 199 aaPredicted RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 TMEM109Q9BVC6 243 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 CACNG4Q9UBN1 327 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 ADGRB2O60241 1585 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 ROBO3Q96MS0 1386 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 GNB5O14775 395 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 CDH5P33151 784 aaPredicted RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 SLC1A2P43004 574 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 TUFMP49411 452 aaKnown RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 FAM174BQ3ZCQ3 159 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 TCEAL5Q5H9L2 206 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 DACT2Q5SW24 774 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 CXCL17Q6UXB2 119 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 FAM124AQ86V42 546 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 LAPTM4BQ86VI4 370 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 PDSS2Q86YH6 399 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 CCDC36Q8IYA8 594 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 CRYBG2Q8N1P7 616 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 SPERTQ8NA61 448 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 PCSK9Q8NBP7 692 aaKnown RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 RAB2BQ8WUD1 216 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 SNX33Q8WV41 574 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 FAM129BQ96TA1 746 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 RIMKLBQ9ULI2 386 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 OR51F1A6NGY5 319 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 ANXA4P09525 319 aaPredicted RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 CTSEP14091 401 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 PKMP14618 531 aaKnown RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 IL7RP16871 459 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 AMD1P17707 334 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 ITPKBP27987 946 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 SVOPLQ8N434 492 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 OR10H4Q8NGA5 316 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 SUSD6Q92537 303 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 GPER1Q99527 375 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 MOV10Q9HCE1 1003 aaKnown RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 MTRRQ9UBK8 725 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 EVLQ9UI08 416 aaPredicted RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 MROH2AA6NES4 1674 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 GLYATL1P3A0A0U1RQE8 302 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 C5orf60A6NFR6 353 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 OR2AG2A6NM03 316 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 TMEM63AO94886 807 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 CLIC3O95833 236 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 CFHP08603 1231 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 OLIG2Q13516 323 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 MIR1-1HGQ9H1L0 117 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 OR51V1Q9H2C8 321 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 ADARB2Q9NS39 739 aaKnown RBP11.9□□□□□ -0.5
UBR4-205ENST00000417040 IMP3Q9NV31 184 aaKnown RBP11.9□□□□□ -0.5
UBR4-205ENST00000417040 GMIPQ9P107 970 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 KRT33AO76009 404 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 RPL3P39023 403 aaKnown RBP11.9□□□□□ -0.5
UBR4-205ENST00000417040 ACTR3P61158 418 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 VBP1P61758 197 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 STXBP1P61764 594 aaKnown RBP11.9□□□□□ -0.5
UBR4-205ENST00000417040 DNASE1L2Q92874 299 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 ROPN1LQ96C74 230 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 CXorf40BQ96DE9 158 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 PRELID1Q9Y255 219 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 RAI2Q9Y5P3 530 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 KCNE2Q9Y6J6 123 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 GCATO75600 419 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 IFNGP01579 166 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 CD52P31358 61 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 RGS1Q08116 209 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 LRRC73Q5JTD7 316 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 TDRPQ86YL5 185 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 SLC43A3Q8NBI5 491 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 RNF31Q96EP0 1072 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 APOBEC3GQ9HC16 384 aaKnown RBP11.9□□□□□ -0.5
UBR4-205ENST00000417040 ZDHHC2Q9UIJ5 367 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 NUP50Q9UKX7 468 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 RIMS1Q86UR5 1692 aaKnown RBP11.9□□□□□ -0.5
UBR4-205ENST00000417040 WWP2O00308 870 aa11.9□□□□□ -0.5
UBR4-205ENST00000417040 CILPO75339 1184 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms