RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 SIGLEC6O43699 453 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 NUDT21O43809 227 aaKnown RBP11.7□□□□□ -0.54
ATG4B-207ENST00000415107 TUBBP07437 444 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 ABHD2P08910 425 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 ERVK-10P10266 1014 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 PKMP14618 531 aaKnown RBP11.7□□□□□ -0.54
ATG4B-207ENST00000415107 IDSP22304 550 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 ATP5DP30049 168 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 SSTR1P30872 391 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 CD151P48509 253 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 RPIAP49247 311 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 DUSP3P51452 185 aaPredicted RBP11.7□□□□□ -0.54
ATG4B-207ENST00000415107 GPX6P59796 221 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 GBX1Q14549 363 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 RSPO4Q2I0M5 234 aaPredicted RBP11.7□□□□□ -0.54
ATG4B-207ENST00000415107 C14orf28Q4W4Y0 310 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 CTSL3PQ5NE16 218 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 SLC30A9Q6PML9 568 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 C3orf62Q6ZUJ4 267 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 MICALCLQ6ZW33 695 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 ZNF438Q7Z4V0 828 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 DENND6AQ8IWF6 608 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 SLC35F3Q8IY50 421 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 UNC5BQ8IZJ1 945 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 SFRP1Q8N474 314 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 EID2Q8N6I1 236 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 IFT81Q8WYA0 676 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 CDKL2Q92772 493 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 C9orf72Q96LT7 481 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 TXLNGYQ9BZA5 131 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 CDC42EP4Q9H3Q1 356 aaKnown RBP11.7□□□□□ -0.54
ATG4B-207ENST00000415107 CAAP1Q9H8G2 361 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 UCK1Q9HA47 277 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 SARS2Q9NP81 518 aaKnown RBP11.7□□□□□ -0.54
ATG4B-207ENST00000415107 KLC4Q9NSK0 619 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 SPATS2LQ9NUQ6 558 aaKnown RBP11.7□□□□□ -0.54
ATG4B-207ENST00000415107 IL1RAPL1Q9NZN1 696 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 ZFATQ9P243 1243 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 FTSJ1Q9UET6 329 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 TBC1D29Q9UFV1 150 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 NFU1Q9UMS0 254 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 KCNK6Q9Y257 313 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 PRKAB1Q9Y478 270 aa11.7□□□□□ -0.54
ATG4B-207ENST00000415107 ARHGEF17Q96PE2 2063 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-207ENST00000415107 EIF3FO00303 357 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-207ENST00000415107 FFAR2O15552 330 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 GPC4O75487 556 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 LDOC1O95751 146 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-207ENST00000415107 GLB1P16278 677 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 CKMT2P17540 419 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 XRCC1P18887 633 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-207ENST00000415107 MCM3P25205 808 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 GABRB3P28472 473 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 PHBP35232 272 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 ACADVLP49748 655 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 CTBP1Q13363 440 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 PUM1Q14671 1186 aaKnown RBP eCLIP11.69□□□□□ -0.54
ATG4B-207ENST00000415107 NR0B2Q15466 257 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 DEFB133Q30KQ1 61 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 HP1BP3Q5SSJ5 553 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-207ENST00000415107 CAPRIN2Q6IMN6 1127 aaKnown RBP11.69□□□□□ -0.54
ATG4B-207ENST00000415107 IYDQ6PHW0 289 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 TRMT10CQ7L0Y3 403 aaKnown RBP11.69□□□□□ -0.54
ATG4B-207ENST00000415107 DET1Q7L5Y6 550 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 LDB1Q86U70 411 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-207ENST00000415107 CCDC25Q86WR0 208 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 RBM12BQ8IXT5 1001 aaKnown RBP11.69□□□□□ -0.54
ATG4B-207ENST00000415107 OTUD6BQ8N6M0 293 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 FAM46DQ8NEK8 389 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 SETD7Q8WTS6 366 aaKnown RBP11.69□□□□□ -0.54
ATG4B-207ENST00000415107 ZDHHC1Q8WTX9 485 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 ZFPM2Q8WW38 1151 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 ASZ1Q8WWH4 475 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 UBXN4Q92575 508 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 CNDP2Q96KP4 475 aaKnown RBP11.69□□□□□ -0.54
ATG4B-207ENST00000415107 OR52A5Q9H2C5 316 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 IARS2Q9NSE4 1012 aaKnown RBP11.69□□□□□ -0.54
ATG4B-207ENST00000415107 POT1Q9NUX5 634 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 NINJ2Q9NZG7 142 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 MED16Q9Y2X0 877 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 PLEKHM1Q9Y4G2 1056 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 PCNX2A6NKB5 2137 aa11.69□□□□□ -0.54
ATG4B-207ENST00000415107 SLCO2B1O94956 709 aa11.68□□□□□ -0.54
ATG4B-207ENST00000415107 AHSGP02765 367 aa11.68□□□□□ -0.54
ATG4B-207ENST00000415107 BRAFP15056 766 aa11.68□□□□□ -0.54
ATG4B-207ENST00000415107 AOAHP28039 575 aa11.68□□□□□ -0.54
ATG4B-207ENST00000415107 CSE1LP55060 971 aaKnown RBP11.68□□□□□ -0.54
ATG4B-207ENST00000415107 EIF3BP55884 814 aaKnown RBP11.68□□□□□ -0.54
ATG4B-207ENST00000415107 UBE2IP63279 158 aaKnown RBP11.68□□□□□ -0.54
ATG4B-207ENST00000415107 MPP1Q00013 466 aa11.68□□□□□ -0.54
ATG4B-207ENST00000415107 NFE2L1Q14494 772 aa11.68□□□□□ -0.54
ATG4B-207ENST00000415107 TRIP6Q15654 476 aaKnown RBP11.68□□□□□ -0.54
ATG4B-207ENST00000415107 CLPPQ16740 277 aaPredicted RBP11.68□□□□□ -0.54
ATG4B-207ENST00000415107 ZNF789Q5FWF6 425 aa11.68□□□□□ -0.54
ATG4B-207ENST00000415107 PLEKHS1Q5SXH7 462 aa11.68□□□□□ -0.54
ATG4B-207ENST00000415107 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.68□□□□□ -0.54
ATG4B-207ENST00000415107 PTRHD1Q6GMV3 140 aaKnown RBP11.68□□□□□ -0.54
ATG4B-207ENST00000415107 FAM83HQ6ZRV2 1179 aaPredicted RBP11.68□□□□□ -0.54
ATG4B-207ENST00000415107 SLC22A15Q8IZD6 547 aa11.68□□□□□ -0.54
ATG4B-207ENST00000415107 KYQ8NBH2 561 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms