RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 SMYD1Q8NB12 490 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 OR4F6Q8NGB9 312 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 FBXO32Q969P5 355 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 ERLEC1Q96DZ1 483 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 ITCHQ96J02 903 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 UROC1Q96N76 676 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 PSKH2Q96QS6 385 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 BOCQ9BWV1 1114 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 NUSAP1Q9BXS6 441 aaKnown RBP9.73□□□□□ -0.85
SS18-203ENST00000415083 FANCEQ9HB96 536 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 MARCH5Q9NX47 278 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 SMPD4Q9NXE4 827 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 TAS2R13Q9NYV9 303 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 ZIM2Q9NZV7 527 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 PRSS21Q9Y6M0 314 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 J3QRK9 145 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 TSPAN3O60637 253 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 KCNH1O95259 989 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 STAMBPO95630 424 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 CAPN1P07384 714 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 JUNBP17275 347 aaPredicted RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 CRHBPP24387 322 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 KCNK10P57789 538 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 NKX3-2P78367 333 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 GNA12Q03113 381 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 KCNC4Q03721 635 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 CD300CQ08708 224 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 TAF1AQ15573 450 aaPredicted RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 MAP7D1Q3KQU3 841 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 SLC44A4Q53GD3 710 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 GLT6D1Q7Z4J2 308 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 GOLGA7Q7Z5G4 137 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 TBC1D21Q8IYX1 336 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 TNIP2Q8NFZ5 429 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 BCL7CQ8WUZ0 217 aaPredicted RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 FBXL8Q96CD0 374 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 ZNF382Q96SR6 550 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 LRRC3Q9BY71 257 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 EXD2Q9NVH0 621 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 AASSQ9UDR5 926 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 LEF1Q9UJU2 399 aaPredicted RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 DOLKQ9UPQ8 538 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 INVSQ9Y283 1065 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 DNAH14Q0VDD8 3507 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 MTMR11A4FU01 709 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 NOBOXO60393 691 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 CELF2O95319 508 aaKnown RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 CDH1P12830 882 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 CD6P30203 668 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 MC4RP32245 332 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 MAGEA10P43363 369 aaPredicted RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 PIK3CGP48736 1102 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 MAPKAPK2P49137 400 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 GPNMBQ14956 572 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 KCNA10Q16322 511 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 RBBP7Q16576 425 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 SPATS1Q496A3 300 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 FAM26DQ5JW98 314 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 CYP20A1Q6UW02 462 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 SUSD1Q6UWL2 747 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 GPRIN3Q6ZVF9 776 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 SLC15A4Q8N697 577 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 FNDC5Q8NAU1 212 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 ZNF548Q8NEK5 533 aaPredicted RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 GIPC2Q8TF65 315 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 GTF2H4Q92759 462 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 FUBP3Q96I24 572 aaKnown RBP eCLIP9.72□□□□□ -0.853e-6■□□□□ 10.3
SS18-203ENST00000415083 FAM210AQ96ND0 272 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 TOR3AQ9H497 397 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 PLGRKTQ9HBL7 147 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 THEGQ9P2T0 379 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 DNMT3BQ9UBC3 853 aaKnown RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 ERVK-11Q9UQG0 969 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 TRBV5-3A0A0A0MS03 114 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 TMEM189-UBE2V1I3L0A0 370 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 ARNTLO00327 626 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 INSIG1O15503 277 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 SERPINF2P08697 491 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 MBL2P11226 248 aaPredicted RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 PKMP14618 531 aaKnown RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 EPORP19235 508 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 PCMT1P22061 227 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 UGT1A1P22309 533 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 UGT1A4P22310 534 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 UGT1A3P35503 534 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 UGT1A5P35504 534 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 GDF5P43026 501 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 MAGEA11P43364 429 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 CCR3P51677 355 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 YBEYP58557 167 aaPredicted RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 PPP2R2BQ00005 443 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 RAD51Q06609 339 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 ZNF235Q14590 738 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 SPCS2Q15005 226 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 CXorf57Q6NSI4 855 aaKnown RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 R3HCC1LQ7Z5L2 792 aaKnown RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 ABI1Q8IZP0 508 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 KRTCAP2Q8N6L1 136 aa9.72□□□□□ -0.85
SS18-203ENST00000415083 CHDHQ8NE62 594 aaPredicted RBP9.72□□□□□ -0.85
SS18-203ENST00000415083 ZNF420Q8TAQ5 688 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms