RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 CDK16Q00536 496 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 ZBTB17Q13105 803 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 GRM3Q14832 879 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 CYTH1Q15438 398 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 SLC14A2Q15849 920 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 LRRC73Q5JTD7 316 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 SP5Q6BEB4 398 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 C6orf15Q6UXA7 325 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 GDPD4Q6W3E5 623 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 SPNS3Q6ZMD2 512 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 LEKR1Q6ZMV7 388 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 ARHGAP22Q7Z5H3 698 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 CNTD1Q8N815 330 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 Q8NA96 180 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 OR10G6Q8NH81 332 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 THAP4Q8WY91 577 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 SNF8Q96H20 258 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 GDAP1L1Q96MZ0 367 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 MGME1Q9BQP7 344 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 TRIM55Q9BYV6 548 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 RAB6BQ9NRW1 208 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 FAM114A2Q9NRY5 505 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 SPATS2LQ9NUQ6 558 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 TMEM9Q9P0T7 183 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 WHRNQ9P202 907 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 G3BP2Q9UN86 482 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 LRP4O75096 1905 aa13.36□□□□□ -0.27
RAPGEF1-204ENST00000414781 MED13LQ71F56 2210 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 KATNA1O75449 491 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 CD160O95971 181 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 RHOXF2BP0C7M4 288 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 ZSCAN5DPP0CG00 497 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 ETS1P14921 441 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 NFKBIAP25963 317 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 PTGER4P35408 488 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 GEMP55040 296 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 AP1S1P61966 158 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 BASP1P80723 227 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 SLC7A5Q01650 507 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 GUCY2DQ02846 1103 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 CUL1Q13616 776 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 TRIP13Q15645 432 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 CHRNA6Q15825 494 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 MYLK3Q32MK0 819 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 DUPD1Q68J44 220 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 ALG1LQ6GMV1 187 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 WDR74Q6RFH5 385 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 TMEM135Q86UB9 458 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 EIF1ADQ8N9N8 165 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 TSEN2Q8NCE0 465 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 CCL4L1Q8NHW4 92 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 AHCYL2Q96HN2 611 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 NUDCD1Q96RS6 583 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 RHOXF2Q9BQY4 288 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 MFRPQ9BY79 579 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 FRMD8Q9BZ67 464 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 ULBP3Q9BZM4 244 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 TAAR2Q9P1P5 351 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 COQ6Q9Y2Z9 468 aa13.35□□□□□ -0.27
RAPGEF1-204ENST00000414781 CSMD2Q7Z408 3487 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 ANKHD1Q8IWZ3 2542 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 INSIG1O15503 277 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 HLA-DQB2P05538 268 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 NFKB1P19838 968 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 VPS41P49754 854 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 SCNN1BP51168 640 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 MPP3Q13368 585 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 MORF4L2Q15014 288 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 PPP1R21Q6ZMI0 780 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 CEP128Q6ZU80 1094 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 SRLQ86TD4 932 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 LINC00523Q86TU6 105 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 HOOK3Q86VS8 718 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 PPIL6Q8IXY8 311 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.34□□□□□ -0.275e-8■■■■■ 65.3
RAPGEF1-204ENST00000414781 FUBP1Q96AE4 644 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 STAMBPL1Q96FJ0 436 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 IMP4Q96G21 291 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 TUBGCP5Q96RT8 1024 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 TRIM51Q9BSJ1 452 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 CEP41Q9BYV8 373 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 TSPYL1Q9H0U9 437 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 ETNK1Q9HBU6 452 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 APMAPQ9HDC9 416 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 ACSS2Q9NR19 701 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 EIF2B3Q9NR50 452 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 TRNAU1APQ9NX07 287 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 FAM153AQ9UHL3 310 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 ANAPC5Q9UJX4 755 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 ITGB1BP2Q9UKP3 347 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 SNX24Q9Y343 169 aa13.34□□□□□ -0.27
RAPGEF1-204ENST00000414781 POLEQ07864 2286 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 A0A1W2PQ67 120 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 PRSS38A1L453 326 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 DNALI1O14645 258 aaPredicted RBP13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 PPM1DO15297 605 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 METTL18O95568 372 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 EPOP01588 193 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 APRTP07741 180 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms