RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 TRBC1P01850 177 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 MMEP08473 750 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 KRT3P12035 628 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 MMP8P22894 467 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 CSNK1G2P78368 415 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 SRSF11Q05519 484 aaKnown RBP15.34■□□□□ 0.05
CPNE1-208ENST00000414711 TYRO3Q06418 890 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 LTBQ06643 244 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 RALGPS1Q5JS13 557 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 IRAK1BP1Q5VVH5 260 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 ZNF385CQ66K41 422 aaPredicted RBP15.34■□□□□ 0.05
CPNE1-208ENST00000414711 MEX3BQ6ZN04 569 aaKnown RBP15.34■□□□□ 0.05
CPNE1-208ENST00000414711 NOP9Q86U38 636 aaKnown RBP15.34■□□□□ 0.05
CPNE1-208ENST00000414711 RAVER1Q8IY67 606 aaKnown RBP15.34■□□□□ 0.05
CPNE1-208ENST00000414711 CARFQ8N187 725 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 ACBD4Q8NC06 268 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 C17orf62Q9BQA9 187 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 C11orf70Q9BRQ4 267 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 ENKD1Q9H0I2 346 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 DNPEPQ9ULA0 475 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 ABCA4P78363 2273 aa15.34■□□□□ 0.05
CPNE1-208ENST00000414711 GTPBP10A4D1E9 387 aaKnown RBP15.33■□□□□ 0.04
CPNE1-208ENST00000414711 AGPSO00116 658 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 ATMINO43313 823 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-208ENST00000414711 ALOX12BO75342 701 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 IDSP22304 550 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 IL4RP24394 825 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 EPHB1P54762 984 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 CASP6P55212 293 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 FOXD4Q12950 439 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-208ENST00000414711 CT47A1Q5JQC4 288 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-208ENST00000414711 PRAMEF13Q5VWM6 474 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 MLIPQ5VWP3 458 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 FAAH2Q6GMR7 532 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 FBXO38Q6PIJ6 1188 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 B4GALNT4Q76KP1 1039 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 LRRTM4Q86VH4 590 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 OR2Y1Q8NGV0 311 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 TAAR6Q96RI8 345 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 FOXC2Q99958 501 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 FAM83DQ9H4H8 585 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 DLL4Q9NR61 685 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 GPATCH2LQ9NWQ4 482 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 HRASLS2Q9NWW9 162 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 GPN3Q9UHW5 284 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-208ENST00000414711 FBXL4Q9UKA2 621 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 WDR37Q9Y2I8 494 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 STAB1Q9NY15 2570 aa15.33■□□□□ 0.04
CPNE1-208ENST00000414711 NUP210LQ5VU65 1888 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 VEGFDO43915 354 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 FZD6O60353 706 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 CLDN7O95471 211 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 DNAJA1P31689 397 aaKnown RBP15.32■□□□□ 0.04
CPNE1-208ENST00000414711 HALP42357 657 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 SPINT3P49223 89 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 IST1P53990 364 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 INAQ16352 499 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 ZNF569Q5MCW4 686 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 ADGRG6Q86SQ4 1221 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 OOSP2Q86WS3 158 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 BBS5Q8N3I7 341 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 CATSPER1Q8NEC5 780 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 PPM1MQ96MI6 270 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 NAT10Q9H0A0 1025 aaKnown RBP15.32■□□□□ 0.04
CPNE1-208ENST00000414711 TRIM39Q9HCM9 518 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 SLC6A20Q9NP91 592 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 SEC14L3Q9UDX4 400 aa15.32■□□□□ 0.04
CPNE1-208ENST00000414711 RPH3AQ9Y2J0 694 aaPredicted RBP15.32■□□□□ 0.04
CPNE1-208ENST00000414711 DOCK10Q96BY6 2186 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 DAPK3O43293 454 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 SLC25A14O95258 325 aaPredicted RBP15.31■□□□□ 0.04
CPNE1-208ENST00000414711 PEX11BO96011 259 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 ESRRAP11474 423 aaPredicted RBP15.31■□□□□ 0.04
CPNE1-208ENST00000414711 KPNA2P52292 529 aaKnown RBP15.31■□□□□ 0.04
CPNE1-208ENST00000414711 FOXL2P58012 376 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 RBPJQ06330 500 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 DPCR1Q3MIW9 517 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 ARMC6Q6NXE6 501 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 WDR59Q6PJI9 974 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 RFX8Q6ZV50 586 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 ZNF547Q8IVP9 402 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 OR1N1Q8NGS0 311 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 SPATA3Q8NHX4 192 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 PTERQ96BW5 349 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 TREX2Q9BQ50 279 aaPredicted RBP15.31■□□□□ 0.04
CPNE1-208ENST00000414711 SELENOOQ9BVL4 669 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 SYTL2Q9HCH5 934 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 PKD2L2Q9NZM6 624 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 AP4E1Q9UPM8 1137 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 FHOD1Q9Y613 1164 aa15.31■□□□□ 0.04
CPNE1-208ENST00000414711 C1orf232A0A0U1RR37 186 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 CCDC66A2RUB6 948 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 E7EQ34 232 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 ZNF749O43361 778 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 UMODP07911 640 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 HBQ1P09105 142 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 ATXN8OSP0DMR3 200 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 FOSL1P15407 271 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 ERCC2P18074 760 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 PREPP48147 710 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms