RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 GABPB2Q8TAK5 448 aaPredicted RBP17.4■□□□□ 0.38
SBDS-202ENST00000414306 ZDHHC1Q8WTX9 485 aa17.4■□□□□ 0.38
SBDS-202ENST00000414306 TSR3Q9UJK0 312 aaKnown RBP17.4■□□□□ 0.38
SBDS-202ENST00000414306 PCOLCE2Q9UKZ9 415 aa17.4■□□□□ 0.38
SBDS-202ENST00000414306 AHSGP02765 367 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 FTH1P02794 183 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 GSTA2P09210 222 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 KCNA4P22459 653 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 TNFRSF8P28908 595 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 STX2P32856 288 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 SLMAPQ14BN4 828 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 SYTL3Q4VX76 610 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 ZNF549Q6P9A3 640 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 DBX2Q6ZNG2 339 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 STRA8Q7Z7C7 330 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 RELL1Q8IUW5 271 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 SLC35F3Q8IY50 421 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 CNDP2Q96KP4 475 aaKnown RBP17.39■□□□□ 0.37
SBDS-202ENST00000414306 APOLD1Q96LR9 279 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 CCDC68Q9H2F9 335 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 FTSJ1Q9UET6 329 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 VPS9D1Q9Y2B5 631 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 CEP250Q9BV73 2442 aa17.39■□□□□ 0.37
SBDS-202ENST00000414306 TPP1O14773 563 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 ESR1P03372 595 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 PKMP14618 531 aaKnown RBP17.38■□□□□ 0.37
SBDS-202ENST00000414306 CHRM3P20309 590 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 IDSP22304 550 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 RPS3P23396 243 aaKnown RBP eCLIP17.38■□□□□ 0.37
SBDS-202ENST00000414306 CCR7P32248 378 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 LEPRP48357 1165 aaKnown RBP17.38■□□□□ 0.37
SBDS-202ENST00000414306 PMS2P54278 862 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 MAZP56270 477 aaKnown RBP17.38■□□□□ 0.37
SBDS-202ENST00000414306 DNAJC3Q13217 504 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 CCDC157Q569K6 752 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 RBM20Q5T481 1227 aaKnown RBP17.38■□□□□ 0.37
SBDS-202ENST00000414306 ZCCHC8Q6NZY4 707 aaKnown RBP17.38■□□□□ 0.37
SBDS-202ENST00000414306 XKR5Q6UX68 686 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 LRRC6Q86X45 466 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 PPM1NQ8N819 430 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 GPATCH11Q8N954 259 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 HM13Q8TCT9 377 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 CDKL2Q92772 493 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 LINC00615Q96LM1 132 aaPredicted RBP17.38■□□□□ 0.37
SBDS-202ENST00000414306 DUSP23Q9BVJ7 150 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 PARD6BQ9BYG5 372 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 COG4Q9H9E3 785 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 SCHIP1Q9P0W5 487 aaPredicted RBP17.38■□□□□ 0.37
SBDS-202ENST00000414306 GALPQ9UBC7 116 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 WDR37Q9Y2I8 494 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 PCDHB1Q9Y5F3 818 aa17.38■□□□□ 0.37
SBDS-202ENST00000414306 CFAP20Q9Y6A4 193 aaKnown RBP17.38■□□□□ 0.37
SBDS-202ENST00000414306 DNMT3AQ9Y6K1 912 aaPredicted RBP17.38■□□□□ 0.37
SBDS-202ENST00000414306 COL5A1P20908 1838 aaPredicted RBP17.38■□□□□ 0.37
SBDS-202ENST00000414306 FAM159BA6NKW6 160 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 E5RI56 91 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 QSOX1O00391 747 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 SLC30A4O14863 429 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 SPAG6O75602 509 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 FAM155BO75949 473 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 LDOC1O95751 146 aaPredicted RBP17.37■□□□□ 0.37
SBDS-202ENST00000414306 PHBP35232 272 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 CD151P48509 253 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 CLCNKAP51800 687 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 PGGT1BP53609 377 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 DAB2P98082 770 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 LVRNQ6Q4G3 990 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 KIAA0408Q6ZU52 694 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 NAGSQ8N159 534 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 ARL10Q8N8L6 244 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 SPDYE1Q8NFV5 336 aaPredicted RBP17.37■□□□□ 0.37
SBDS-202ENST00000414306 TSSK1BQ9BXA7 367 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 WWP1Q9H0M0 922 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 PIEZO1Q92508 2521 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 OR52A4PA6NMU1 304 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 NOBOXO60393 691 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 CBFA2T3O75081 653 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 C1QAP02745 245 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 BRAFP15056 766 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 SAT1P21673 171 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 PDHA2P29803 388 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 DMPKQ09013 629 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 HSPA14Q0VDF9 509 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 METRNLQ641Q3 311 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 DUS1LQ6P1R4 473 aaKnown RBP17.37■□□□□ 0.37
SBDS-202ENST00000414306 PIP4P1Q86T03 277 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 SDR16C5Q8N3Y7 309 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 EIF1ADQ8N9N8 165 aaKnown RBP17.37■□□□□ 0.37
SBDS-202ENST00000414306 TXNDC16Q9P2K2 825 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 RABGEF1Q9UJ41 708 aa17.37■□□□□ 0.37
SBDS-202ENST00000414306 LY6G6EA0A0G2JKS1 128 aa17.36■□□□□ 0.37
SBDS-202ENST00000414306 CPED1A4D0V7 1026 aa17.36■□□□□ 0.37
SBDS-202ENST00000414306 A6NCN8 305 aa17.36■□□□□ 0.37
SBDS-202ENST00000414306 PRR19A6NJB7 356 aa17.36■□□□□ 0.37
SBDS-202ENST00000414306 F8W8V4 182 aa17.36■□□□□ 0.37
SBDS-202ENST00000414306 GIPC1O14908 333 aa17.36■□□□□ 0.37
SBDS-202ENST00000414306 SLC35G4P0C7Q5 338 aa17.36■□□□□ 0.37
SBDS-202ENST00000414306 F3P13726 295 aa17.36■□□□□ 0.37
SBDS-202ENST00000414306 ADARP55265 1226 aaKnown RBP17.36■□□□□ 0.37
SBDS-202ENST00000414306 CLCA4Q14CN2 919 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms