RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 MAATS1Q7Z4T9 603 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 PLXDC1Q8IUK5 500 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 PIANPQ8IYJ0 282 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 FBXO39Q8N4B4 442 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 BBOF1Q8ND07 529 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 OR4D9Q8NGE8 314 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 ZFPM2Q8WW38 1151 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 LIN37Q96GY3 246 aaPredicted RBP14.42□□□□□ -0.1
CHD1-202ENST00000414220 ZNF778Q96MU6 729 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 SERPINB12Q96P63 405 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 TMEM121BQ9BXQ6 578 aaPredicted RBP14.42□□□□□ -0.1
CHD1-202ENST00000414220 TREX1Q9NSU2 369 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 ATXN7L1Q9ULK2 861 aaPredicted RBP14.42□□□□□ -0.1
CHD1-202ENST00000414220 PSMD13Q9UNM6 376 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 PCDHB1Q9Y5F3 818 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 MAD1L1Q9Y6D9 718 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 FAM237BA0A1B0GVD1 139 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 PRR19A6NJB7 356 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 OR52A4PA6NMU1 304 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 LIN7AO14910 233 aaPredicted RBP14.41□□□□□ -0.1
CHD1-202ENST00000414220 JMJD7P0C870 316 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 NMBRP28336 390 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 THOC5Q13769 683 aaKnown RBP14.41□□□□□ -0.1
CHD1-202ENST00000414220 RPE65Q16518 533 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 SYTL3Q4VX76 610 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 ANKRD22Q5VYY1 191 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 IZUMO3Q5VZ72 239 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 WDR74Q6RFH5 385 aaPredicted RBP14.41□□□□□ -0.1
CHD1-202ENST00000414220 ZNF534Q76KX8 674 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 RAB11FIP2Q7L804 512 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 CAND1Q86VP6 1230 aaKnown RBP14.41□□□□□ -0.1
CHD1-202ENST00000414220 LRRC6Q86X45 466 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 CLDN19Q8N6F1 224 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 NAT8LQ8N9F0 302 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 GSDMBQ8TAX9 411 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 MDM1Q8TC05 714 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 NCSTNQ92542 709 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 ELMO1Q92556 727 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 C12orf66Q96MD2 445 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 ZNF578Q96N58 590 aaPredicted RBP14.41□□□□□ -0.1
CHD1-202ENST00000414220 TCF12Q99081 682 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 NAT9Q9BTE0 207 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 FOXP3Q9BZS1 431 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 WWP1Q9H0M0 922 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 RDH14Q9HBH5 336 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 THSD1Q9NS62 852 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 IMP3Q9NV31 184 aaKnown RBP14.41□□□□□ -0.1
CHD1-202ENST00000414220 SCHIP1Q9P0W5 487 aaPredicted RBP14.41□□□□□ -0.1
CHD1-202ENST00000414220 ZNF624Q9P2J8 865 aaPredicted RBP14.41□□□□□ -0.1
CHD1-202ENST00000414220 SATB2Q9UPW6 733 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 PCDHGA8Q9Y5G5 932 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 SCN8AQ9UQD0 1980 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 KNTC1P50748 2209 aa14.41□□□□□ -0.1
CHD1-202ENST00000414220 KIF2AO00139 706 aaPredicted RBP14.4□□□□□ -0.1
CHD1-202ENST00000414220 PRMT5O14744 637 aaPredicted RBP14.4□□□□□ -0.1
CHD1-202ENST00000414220 PLD2O14939 933 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 HGSO14964 777 aaPredicted RBP14.4□□□□□ -0.1
CHD1-202ENST00000414220 KPNA5O15131 536 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 KDM1AO60341 852 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 AVILO75366 819 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 TMEM63AO94886 807 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 UBXN7O94888 489 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 VAPBO95292 243 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 MPOP05164 745 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 PRSS56P0CW18 603 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 MTHFD1P11586 935 aaKnown RBP14.4□□□□□ -0.1
CHD1-202ENST00000414220 BRAFP15056 766 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 CSTF2P33240 577 aaKnown RBP eCLIP14.4□□□□□ -0.1
CHD1-202ENST00000414220 PTGIRP43119 386 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 CD151P48509 253 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 LIMK2P53671 638 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 CKAP4Q07065 602 aaKnown RBP14.4□□□□□ -0.1
CHD1-202ENST00000414220 ZFP36L1Q07352 338 aaKnown RBP14.4□□□□□ -0.1
CHD1-202ENST00000414220 CLCA4Q14CN2 919 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 MORF4L2Q15014 288 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 PLCL1Q15111 1095 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 RNASEH2BQ5TBB1 312 aaKnown RBP14.4□□□□□ -0.1
CHD1-202ENST00000414220 TMEM164Q5U3C3 297 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 NKAIN2Q5VXU1 208 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 PTRHD1Q6GMV3 140 aaKnown RBP14.4□□□□□ -0.1
CHD1-202ENST00000414220 KIAA0930Q6ICG6 404 aaPredicted RBP14.4□□□□□ -0.1
CHD1-202ENST00000414220 FAM83HQ6ZRV2 1179 aaPredicted RBP14.4□□□□□ -0.1
CHD1-202ENST00000414220 ZNF761Q86XN6 746 aaPredicted RBP14.4□□□□□ -0.1
CHD1-202ENST00000414220 JAMLQ86YT9 394 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 LMNTD2Q8IXW0 634 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 PDIK1LQ8N165 341 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 C17orf53Q8N3J3 647 aaPredicted RBP14.4□□□□□ -0.1
CHD1-202ENST00000414220 CALML6Q8TD86 181 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 MFSD3Q96ES6 412 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 PANX3Q96QZ0 392 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 KRT12Q99456 494 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 COG4Q9H9E3 785 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 SLC40A1Q9NP59 571 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 GNPTGQ9UJJ9 305 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 WDR37Q9Y2I8 494 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 RPS6KL1Q9Y6S9 549 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 PTPRBP23467 1997 aa14.4□□□□□ -0.1
CHD1-202ENST00000414220 EFCAB8A8MWE9 144 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 H3BMM5 538 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 RRP8O43159 456 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms