RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CCNYL2Q5T2Q4 361 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 PDSS1Q5T2R2 415 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 PLXDC2Q6UX71 529 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 ZNF852Q6ZMS4 543 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 INTS8Q75QN2 995 aaKnown RBP3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 SLC9B2Q86UD5 537 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 AACSQ86V21 672 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 KBTBD3Q8NAB2 608 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 RBM15BQ8NDT2 890 aaKnown RBP3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 PRPF31Q8WWY3 499 aaKnown RBP3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 LINGO1Q96FE5 620 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 LMLNQ96KR4 655 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 POLR3CQ9BUI4 534 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 SPATC1LQ9H0A9 340 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 KCNK15Q9H427 330 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 PDE7BQ9NP56 450 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 PCDHGB4Q9UN71 923 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 ZNF148Q9UQR1 794 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 PCDHGA5Q9Y5G8 931 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 LOC102723996A0A087X1L8 192 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 A0A1W2PPI3 338 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 PLK4O00444 970 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 CAPN9O14815 690 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 CREG1O75629 220 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 CSPG5O95196 566 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 BMP10O95393 424 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 LDHCP07864 332 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 FMO5P49326 533 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 HSD17B4P51659 736 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 STAT2P52630 851 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 PPP2R2BQ00005 443 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 GRAPQ13588 217 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 KIR2DS3Q14952 304 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 C16orf54Q6UWD8 224 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 PACS1Q6VY07 963 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 KCTD8Q6ZWB6 473 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 BHLHA9Q7RTU4 235 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 LINC00346Q8IVM7 164 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 SCML4Q8N228 414 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 GBGT1Q8N5D6 347 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 OR13A1Q8NGR1 328 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 PTPMT1Q8WUK0 201 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 PAFAH2Q99487 392 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 NUDT16L1Q9BRJ7 211 aaKnown RBP3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 MXD3Q9BW11 206 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 MMP28Q9H239 520 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 MMP27Q9H306 513 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 DENND2DQ9H6A0 471 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 ZFP57Q9NU63 452 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 LARSQ9P2J5 1176 aaKnown RBP3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 ICAM5Q9UMF0 924 aa3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 PTRH2Q9Y3E5 179 aaKnown RBP3.62□□□□□ -1.83
HMGB1P11-201ENST00000413899 CUX2O14529 1486 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 ARHGAP35Q9NRY4 1499 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 RAD54L2Q9Y4B4 1467 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 IGLV5-45A0A087WSX0 123 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 GPR75-ASB3A0A0A6YYF3 556 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 FAM172BPA6NC97 362 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 IFITM10A6NMD0 228 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 MAGEB17A8MXT2 336 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 CTSVO60911 334 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 GCNT3O95395 438 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 BAG4O95429 457 aaKnown RBP3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 LDLRP01130 860 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 TFAP2AP05549 437 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 TPOP07202 933 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 MARK3P27448 753 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 MMP15P51511 669 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 CD81P60033 236 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 TMF1P82094 1093 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 MELKQ14680 651 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 FAM98BQ52LJ0 330 aaKnown RBP3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 SIRPB2Q5JXA9 342 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 DHRS7BQ6IAN0 325 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 GDPD4Q6W3E5 623 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 PIWIL4Q7Z3Z4 852 aaKnown RBP3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 HAUS6Q7Z4H7 955 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 CUZD1Q86UP6 607 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 CIARTQ8N365 385 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 MINDY1Q8N5J2 469 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 PAPD5Q8NDF8 572 aaKnown RBP3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 DMBX1Q8NFW5 382 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 TBC1D16Q8TBP0 767 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 ZNF622Q969S3 477 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 HES6Q96HZ4 224 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 C17orf77Q96MU5 243 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 SLX1AQ9BQ83 275 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 TRMT61BQ9BVS5 477 aaKnown RBP3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 SEMA6AQ9H2E6 1030 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 CHMP1AQ9HD42 196 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 TAS2R14Q9NYV8 317 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 MRPL15Q9P015 296 aaKnown RBP3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 MORF4L1Q9UBU8 362 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 CHORDC1Q9UHD1 332 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 HACL1Q9UJ83 578 aa3.61□□□□□ -1.83
HMGB1P11-201ENST00000413899 MRC2Q9UBG0 1479 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 H0YIN7 160 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 P2RY10O00398 339 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 TO15178 435 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms