RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 MARVELD3Q96A59 401 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 LRFN5Q96NI6 719 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 ZSCAN5AQ9BUG6 496 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 MLPHQ9BV36 600 aaPredicted RBP9.35□□□□□ -0.91
RFFL-203ENST00000413582 TUBB2BQ9BVA1 445 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 NUP85Q9BW27 656 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 HAUS4Q9H6D7 363 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 LATS2Q9NRM7 1088 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 KCND1Q9NSA2 647 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 TCFL5Q9UL49 500 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 SNX7Q9UNH6 387 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 WDR37Q9Y2I8 494 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 ZKSCAN5Q9Y2L8 839 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 TTLL3Q9Y4R7 772 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 CCDC88CQ9P219 2028 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 AKAP9Q99996 3911 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 CSMD2Q7Z408 3487 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 ZFHX3Q15911 3703 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 MED13LQ71F56 2210 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 ANKRD66B4E2M5 251 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 HNRNPRO43390 633 aaKnown RBP9.34□□□□□ -0.91
RFFL-203ENST00000413582 CAPN1P07384 714 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 MMP2P08253 660 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 RAB40ALP0C0E4 278 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 RARAP10276 462 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 IDSP22304 550 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 CES1P23141 567 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 GRNP28799 593 aaKnown RBP9.34□□□□□ -0.91
RFFL-203ENST00000413582 RORAP35398 523 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 VAV2P52735 878 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 HSD11B2P80365 405 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 KLHL30Q0D2K2 578 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 ABRQ12979 859 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 RAPSNQ13702 412 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 ATP1A4Q13733 1029 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 GPR19Q15760 415 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 BOLA3Q53S33 107 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 CRB2Q5IJ48 1285 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 DNTTIP2Q5QJE6 756 aaKnown RBP9.34□□□□□ -0.91
RFFL-203ENST00000413582 PLEKHS1Q5SXH7 462 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 PRAMEF17Q5VTA0 474 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 PDPK2PQ6A1A2 396 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 MED25Q71SY5 747 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 DSELQ8IZU8 1212 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 CISD2Q8N5K1 135 aaKnown RBP9.34□□□□□ -0.91
RFFL-203ENST00000413582 TRAM1L1Q8N609 369 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 ZBTB2Q8N680 514 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 GPR26Q8NDV2 337 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 INPP5DQ92835 1189 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 ZNF501Q96CX3 271 aaPredicted RBP9.34□□□□□ -0.91
RFFL-203ENST00000413582 MOCOSQ96EN8 888 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 CCDC42Q96M95 316 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 CD180Q99467 661 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 BARD1Q99728 777 aaKnown RBP9.34□□□□□ -0.91
RFFL-203ENST00000413582 NLNQ9BYT8 704 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 KCNF1Q9H3M0 494 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 RBM22Q9NW64 420 aaKnown RBP eCLIP9.34□□□□□ -0.912e-7■■■■□ 22.2
RFFL-203ENST00000413582 C5AR2Q9P296 337 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 TRIM10Q9UDY6 481 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 AMACRQ9UHK6 382 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 ENTPD4Q9Y227 616 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 B3GNT3Q9Y2A9 372 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.34□□□□□ -0.912e-8■■■■■ 28.1
RFFL-203ENST00000413582 ANKRD12Q6UB98 2062 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 DOCK10Q96BY6 2186 aa9.34□□□□□ -0.91
RFFL-203ENST00000413582 ARHGAP10A1A4S6 786 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 MEN1O00255 615 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 DDX3XO00571 662 aaKnown RBP eCLIP9.33□□□□□ -0.921e-14■■■□□ 16.5
RFFL-203ENST00000413582 MATN3O15232 486 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 VEGFDO43915 354 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 LCA5LO95447 670 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 SLC4A1P02730 911 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 KLK3P07288 261 aaPredicted RBP9.33□□□□□ -0.92
RFFL-203ENST00000413582 ARL4DP49703 201 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 RRADP55042 308 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 SLC25A11Q02978 314 aaKnown RBP9.33□□□□□ -0.92
RFFL-203ENST00000413582 CDK18Q07002 472 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 MMRN1Q13201 1228 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 ASTE1Q2TB18 679 aaPredicted RBP9.33□□□□□ -0.92
RFFL-203ENST00000413582 NCBP2-AS2Q69YL0 99 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 TIGD7Q6NT04 549 aaPredicted RBP9.33□□□□□ -0.92
RFFL-203ENST00000413582 KLHL35Q6PF15 583 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 TXLNBQ8N3L3 684 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 OR8K5Q8NH50 307 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 UBE2Q2Q8WVN8 375 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 TEKT4Q8WW24 435 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 FATE1Q969F0 183 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 ZNF653Q96CK0 615 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 UNKQ9C0B0 810 aaKnown RBP9.33□□□□□ -0.92
RFFL-203ENST00000413582 NHEJ1Q9H9Q4 299 aaPredicted RBP9.33□□□□□ -0.92
RFFL-203ENST00000413582 ZFYVE1Q9HBF4 777 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 TMPRSS11EQ9UL52 423 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 BTRCQ9Y297 605 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 NTNG1Q9Y2I2 539 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 EPN1Q9Y6I3 576 aaPredicted RBP9.33□□□□□ -0.92
RFFL-203ENST00000413582 SCINQ9Y6U3 715 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 NUP210LQ5VU65 1888 aa9.33□□□□□ -0.92
RFFL-203ENST00000413582 MYO7BQ6PIF6 2116 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 UBA6A0AVT1 1052 aaPredicted RBP9.32□□□□□ -0.92
RFFL-203ENST00000413582 OR5K3A6NET4 321 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms