RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 PGBD3Q8N328 593 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 DENND6BQ8NEG7 585 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 STAG3L4Q8TBR4 150 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 ZNF473Q8WTR7 871 aaKnown RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 SREK1Q8WXA9 508 aaKnown RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 ASB12Q8WXK4 309 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 ELMO1Q92556 727 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 KLK6Q92876 244 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 GLMNQ92990 594 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 EXT2Q93063 718 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 FUBP1Q96AE4 644 aaKnown RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 CLDN23Q96B33 292 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 CCDC126Q96EE4 140 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 ZNF514Q96K75 400 aaPredicted RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 C7orf26Q96N11 449 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 ASB2Q96Q27 587 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 CCT8L2Q96SF2 557 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 LGR4Q9BXB1 951 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 MFRPQ9BY79 579 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 OR2AG1Q9H205 316 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 EPHX3Q9H6B9 360 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 TRIM39Q9HCM9 518 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 FZD3Q9NPG1 666 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 ATXN10Q9UBB4 475 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 TSR3Q9UJK0 312 aaKnown RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 RNF112Q9ULX5 631 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 CYP8B1Q9UNU6 501 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 CDYLQ9Y232 598 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 OR1A2Q9Y585 309 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 SYCE1LA8MT33 242 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 SUPT3HB4E1H0 165 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 GPR89AB7ZAQ6 455 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 UBXN8O00124 270 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 CHUKO15111 745 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 SLC31A1O15431 190 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 LATO43561 262 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 KLK8O60259 260 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 SMIM24O75264 130 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 SUPT3HO75486 399 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 GPC4O75487 556 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 LYPLA1O75608 230 aaPredicted RBP6.53□□□□□ -1.36
VPS41-204ENST00000413141 IPO13O94829 963 aaKnown RBP6.53□□□□□ -1.36
VPS41-204ENST00000413141 APBB3O95704 486 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 GSTM1P09488 218 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 GPR89BP0CG08 455 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 TPBGLP0DKB5 382 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 MPC1LP0DKB6 136 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 PBLDP30039 288 aaPredicted RBP6.53□□□□□ -1.36
VPS41-204ENST00000413141 ARRB2P32121 409 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 HK3P52790 923 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 KIAA1024LP59773 190 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 ABCE1P61221 599 aaKnown RBP6.53□□□□□ -1.36
VPS41-204ENST00000413141 GSTM4Q03013 218 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 HSPA14Q0VDF9 509 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 ASPHQ12797 758 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 STX3Q13277 289 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 SP140Q13342 867 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 RCN2Q14257 317 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 PLA2G4EQ3MJ16 856 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 SYTL3Q4VX76 610 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 CWF19L1Q69YN2 538 aaKnown RBP6.53□□□□□ -1.36
VPS41-204ENST00000413141 DOK6Q6PKX4 331 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 TMEM220Q6QAJ8 160 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 CRTC3Q6UUV7 619 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 XKR5Q6UX68 686 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 CYHR1Q6ZMK1 362 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 NEK10Q6ZWH5 1172 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 FRA10AC1Q70Z53 315 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 CPLX4Q7Z7G2 160 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 C11orf96Q7Z7L8 435 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 TRAPPC5Q8IUR0 188 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 VRK3Q8IV63 474 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 SLC22A9Q8IVM8 553 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 ZNF547Q8IVP9 402 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 GJD3Q8N144 294 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 SPEM1Q8N4L4 309 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 OXR1Q8N573 874 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 PTGR2Q8N8N7 351 aaPredicted RBP6.53□□□□□ -1.36
VPS41-204ENST00000413141 ASZ1Q8WWH4 475 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 FOXJ1Q92949 421 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 L3HYPDHQ96EM0 354 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 TOE1Q96GM8 510 aaKnown RBP6.53□□□□□ -1.36
VPS41-204ENST00000413141 LINC00615Q96LM1 132 aaPredicted RBP6.53□□□□□ -1.36
VPS41-204ENST00000413141 TMEM237Q96Q45 408 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 SORT1Q99523 831 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 MYOCQ99972 504 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 CCM2Q9BSQ5 444 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 IER2Q9BTL4 223 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 GATA5Q9BWX5 397 aaPredicted RBP6.53□□□□□ -1.36
VPS41-204ENST00000413141 FAM126AQ9BYI3 521 aaPredicted RBP6.53□□□□□ -1.36
VPS41-204ENST00000413141 PITPNM3Q9BZ71 974 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 TPSD1Q9BZJ3 242 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 C20orf27Q9GZN8 174 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 ZNF395Q9H8N7 513 aaPredicted RBP6.53□□□□□ -1.36
VPS41-204ENST00000413141 CYP4F12Q9HCS2 524 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 CD320Q9NPF0 282 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 PHPT1Q9NRX4 125 aaPredicted RBP6.53□□□□□ -1.36
VPS41-204ENST00000413141 THAP1Q9NVV9 213 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 NUDT4Q9NZJ9 180 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 NCKIPSDQ9NZQ3 722 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms