RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 FCGR1AP12314 374 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 STT3AP46977 705 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 IST1P53990 364 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 CDH18Q13634 790 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 ABRAXAS2Q15018 415 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 PABPC1LQ4VXU2 614 aaKnown RBP13.63□□□□□ -0.23
NUB1-201ENST00000413040 AARS2Q5JTZ9 985 aaKnown RBP13.63□□□□□ -0.23
NUB1-201ENST00000413040 INTS11Q5TA45 600 aaKnown RBP13.63□□□□□ -0.23
NUB1-201ENST00000413040 FAM117BQ6P1L5 589 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 TBC1D21Q8IYX1 336 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 SEPT8Q92599 483 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 VWA8A3KMH1 1905 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 C1orf232A0A0U1RR37 186 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 FAM234BA2RU67 622 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 H3BNC9 293 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 FFAR2O15552 330 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 EEDO75530 441 aaKnown RBP13.63□□□□□ -0.23
NUB1-201ENST00000413040 SLC25A14O95258 325 aaPredicted RBP13.63□□□□□ -0.23
NUB1-201ENST00000413040 PRAMEF1O95521 474 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 FAM189BP81408 668 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 SMAD3P84022 425 aaKnown RBP13.63□□□□□ -0.23
NUB1-201ENST00000413040 BTG3Q14201 252 aaPredicted RBP13.63□□□□□ -0.23
NUB1-201ENST00000413040 USP41Q3LFD5 358 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 ADGRF1Q5T601 910 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 TBPL2Q6SJ96 375 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 SERPINA9Q86WD7 417 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 HID1Q8IV36 788 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 KCNJ9Q92806 393 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 NCLNQ969V3 563 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 SPATA17Q96L03 361 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 BDH2Q9BUT1 245 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 FARSBQ9NSD9 589 aaKnown RBP13.63□□□□□ -0.23
NUB1-201ENST00000413040 FAM8A1Q9UBU6 413 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 LIMD1Q9UGP4 676 aa13.63□□□□□ -0.23
NUB1-201ENST00000413040 TMX2-CTNND1H3BSU7 103 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 DFNA5O60443 496 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 PTGER3P43115 390 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 ALDH7A1P49419 539 aaKnown RBP13.62□□□□□ -0.23
NUB1-201ENST00000413040 CDK9P50750 372 aaKnown RBP13.62□□□□□ -0.23
NUB1-201ENST00000413040 ARHGEF7Q14155 803 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 ABRAXAS1Q6UWZ7 409 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 NAT16Q8N8M0 369 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 OR10A6Q8NH74 314 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 HM13Q8TCT9 377 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 BCL7CQ8WUZ0 217 aaPredicted RBP13.62□□□□□ -0.23
NUB1-201ENST00000413040 LRRC3Q9BY71 257 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 SLC52A3Q9NQ40 469 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 PKD2L2Q9NZM6 624 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 SH3BP1Q9Y3L3 701 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 RAD51BO15315 384 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 RSL1D1O76021 490 aaKnown RBP13.62□□□□□ -0.23
NUB1-201ENST00000413040 ESR1P03372 595 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 ALDH3B2P48448 385 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 CHRNB3Q05901 458 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 TNK2Q07912 1038 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 LAPTM5Q13571 262 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 ATP6AP1Q15904 470 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 XKR7Q5GH72 579 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 ARMC12Q5T9G4 340 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 MBOAT1Q6ZNC8 495 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 DTWD1Q8N5C7 304 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 MFSD2AQ8NA29 543 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 OR10Q1Q8NGQ4 319 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 MIPOL1Q8TD10 442 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 SCLYQ96I15 445 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 CASD1Q96PB1 797 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 CXorf21Q9HAI6 301 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 GALNT8Q9NY28 637 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 CRLS1Q9UJA2 301 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 RIMKLBQ9ULI2 386 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 ZNF711Q9Y462 761 aa13.62□□□□□ -0.23
NUB1-201ENST00000413040 LAMA2P24043 3122 aaKnown RBP13.61□□□□□ -0.23
NUB1-201ENST00000413040 TYW5A2RUC4 315 aaKnown RBP13.61□□□□□ -0.23
NUB1-201ENST00000413040 ACOX3O15254 700 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 NBNO60934 754 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 SEC22BO75396 215 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 ZDHHC11BP0C7U3 371 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 ZNF7P17097 686 aaPredicted RBP13.61□□□□□ -0.23
NUB1-201ENST00000413040 HRH2P25021 359 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 CAPGP40121 348 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 EEFSECP57772 596 aaKnown RBP13.61□□□□□ -0.23
NUB1-201ENST00000413040 DCTN2Q13561 401 aaKnown RBP13.61□□□□□ -0.23
NUB1-201ENST00000413040 FAM174BQ3ZCQ3 159 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 DEFB128Q7Z7B8 93 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 TNIP2Q8NFZ5 429 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 C12orf43Q96C57 262 aaKnown RBP13.61□□□□□ -0.23
NUB1-201ENST00000413040 ZNF382Q96SR6 550 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 ZBTB18Q99592 522 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 CGREF1Q99674 301 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 HSFX1Q9UBD0 423 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 INPPL1O15357 1258 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 RASAL1O95294 804 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 ELK4P28324 431 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 TUFMP49411 452 aaKnown RBP13.61□□□□□ -0.23
NUB1-201ENST00000413040 RGS4P49798 205 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 CCL23P55773 120 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 HPCAP84074 193 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 IL1RL1Q01638 556 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 FOXM1Q08050 763 aa13.61□□□□□ -0.23
NUB1-201ENST00000413040 CPSF6Q16630 551 aaKnown RBP eCLIP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms