RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 RPE65Q16518 533 aa17.03■□□□□ 0.32
HSPG2-204ENST00000412328 TSTD2Q5T7W7 516 aa17.03■□□□□ 0.32
HSPG2-204ENST00000412328 DUS1LQ6P1R4 473 aaKnown RBP17.03■□□□□ 0.32
HSPG2-204ENST00000412328 PACS1Q6VY07 963 aa17.03■□□□□ 0.32
HSPG2-204ENST00000412328 CMKLR1Q99788 373 aa17.03■□□□□ 0.32
HSPG2-204ENST00000412328 B3GNT4Q9C0J1 378 aa17.03■□□□□ 0.32
HSPG2-204ENST00000412328 SIDT1Q9NXL6 827 aaKnown RBP17.03■□□□□ 0.32
HSPG2-204ENST00000412328 TCAF1Q9Y4C2 921 aa17.03■□□□□ 0.32
HSPG2-204ENST00000412328 CACNA1GO43497 2377 aa17.03■□□□□ 0.32
HSPG2-204ENST00000412328 FER1L5A0AVI2 2057 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-204ENST00000412328 HEATR9A2RTY3 570 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 KLHL33A6NCF5 533 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-204ENST00000412328 AGRPO00253 132 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 FANCGO15287 622 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 VIPP01282 170 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 ANKRD34CP0C6C1 535 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 MTHFD1P11586 935 aaKnown RBP17.02■□□□□ 0.32
HSPG2-204ENST00000412328 ATP1B2P14415 290 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-204ENST00000412328 TPSB2P20231 275 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 MSNP26038 577 aaKnown RBP17.02■□□□□ 0.32
HSPG2-204ENST00000412328 SEMA3AQ14563 771 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 KCNJ11Q14654 390 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 TPSAB1Q15661 275 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 PDZD3Q86UT5 571 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 RBM12BQ8IXT5 1001 aaKnown RBP17.02■□□□□ 0.32
HSPG2-204ENST00000412328 DNAAF3Q8N9W5 541 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 SPDYE1Q8NFV5 336 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-204ENST00000412328 HM13Q8TCT9 377 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 KCNE4Q8WWG9 221 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 PEX13Q92968 403 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 OSBPL9Q96SU4 736 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 WWP1Q9H0M0 922 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 TREX1Q9NSU2 369 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 PSMD13Q9UNM6 376 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 PRSS21Q9Y6M0 314 aa17.02■□□□□ 0.32
HSPG2-204ENST00000412328 BSNQ9UPA5 3926 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 RRP8O43159 456 aaKnown RBP17.01■□□□□ 0.31
HSPG2-204ENST00000412328 JMJD7P0C870 316 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 ADRA1DP25100 572 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 ITIH4Q14624 930 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 ZRANB3Q5FWF4 1079 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 CAPRIN2Q6IMN6 1127 aaKnown RBP17.01■□□□□ 0.31
HSPG2-204ENST00000412328 C4orf22Q6V702 233 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 PPP1R21Q6ZMI0 780 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 DTX1Q86Y01 620 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 CLDN19Q8N6F1 224 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 HEXDCQ8WVB3 486 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 USP7Q93009 1102 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 NAF1Q96HR8 494 aaKnown RBP17.01■□□□□ 0.31
HSPG2-204ENST00000412328 SGSM3Q96HU1 749 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 PBKQ96KB5 322 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 INSM2Q96T92 566 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-204ENST00000412328 DPH1Q9BZG8 443 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 OR52A5Q9H2C5 316 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 COG4Q9H9E3 785 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 HOMER3Q9NSC5 361 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 OCIAD1Q9NX40 245 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 PCDHGA3Q9Y5H0 932 aa17.01■□□□□ 0.31
HSPG2-204ENST00000412328 C17orf113A0A1B0GUU1 675 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 E7EVH7 732 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 ZSCAN12O43309 604 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 TMEM63AO94886 807 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 UBXN7O94888 489 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 GOT2P00505 430 aaKnown RBP17■□□□□ 0.31
HSPG2-204ENST00000412328 ARNTP27540 789 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 MAPK9P45984 424 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 LEPRP48357 1165 aaKnown RBP17■□□□□ 0.31
HSPG2-204ENST00000412328 PPP1CAP62136 330 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 BASP1P80723 227 aaKnown RBP17■□□□□ 0.31
HSPG2-204ENST00000412328 SKIDA1Q1XH10 827 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 AFTPHQ6ULP2 937 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 TRIM48Q8IWZ4 208 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 AGBL5Q8NDL9 886 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 ACTRT1Q8TDG2 376 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 SNRNP27Q8WVK2 155 aaKnown RBP17■□□□□ 0.31
HSPG2-204ENST00000412328 NCSTNQ92542 709 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 CXorf40BQ96DE9 158 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 AHCYL2Q96HN2 611 aaKnown RBP17■□□□□ 0.31
HSPG2-204ENST00000412328 AP1M1Q9BXS5 423 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 RAB33BQ9H082 229 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 PYCARDQ9ULZ3 195 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 SNX12Q9UMY4 172 aa17■□□□□ 0.31
HSPG2-204ENST00000412328 CFAP20Q9Y6A4 193 aaKnown RBP17■□□□□ 0.31
HSPG2-204ENST00000412328 B4E171 279 aa16.99■□□□□ 0.31
HSPG2-204ENST00000412328 CFAP99D6REC4 459 aa16.99■□□□□ 0.31
HSPG2-204ENST00000412328 PGRMC1O00264 195 aaKnown RBP16.99■□□□□ 0.31
HSPG2-204ENST00000412328 CES2O00748 559 aa16.99■□□□□ 0.31
HSPG2-204ENST00000412328 LIPCP11150 499 aa16.99■□□□□ 0.31
HSPG2-204ENST00000412328 RALBP11234 206 aa16.99■□□□□ 0.31
HSPG2-204ENST00000412328 TYRP1P17643 537 aa16.99■□□□□ 0.31
HSPG2-204ENST00000412328 TSPAN7P41732 249 aa16.99■□□□□ 0.31
HSPG2-204ENST00000412328 HALP42357 657 aa16.99■□□□□ 0.31
HSPG2-204ENST00000412328 MAPK10P53779 464 aa16.99■□□□□ 0.31
HSPG2-204ENST00000412328 CRADDP78560 199 aa16.99■□□□□ 0.31
HSPG2-204ENST00000412328 ANKRD22Q5VYY1 191 aa16.99■□□□□ 0.31
HSPG2-204ENST00000412328 LRRC69Q6ZNQ3 347 aa16.99■□□□□ 0.31
HSPG2-204ENST00000412328 PRSS42Q7Z5A4 293 aa16.99■□□□□ 0.31
HSPG2-204ENST00000412328 JPH3Q8WXH2 748 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 695.8 ms