RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 CRYAAP02489 173 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 EDN2P20800 178 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 GNLYP22749 145 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 RFC1P35251 1148 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 GARSP41250 739 aaKnown RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 TMPOP42166 694 aaKnown RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 PPP3CCP48454 512 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 AMPHP49418 695 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 CEBPZQ03701 1054 aaKnown RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 ACTN3Q08043 901 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 DRP2Q13474 957 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 RUNX2Q13950 521 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 FGFBP1Q14512 234 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 HSPB2Q16082 182 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 KRT24Q2M2I5 525 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 TCTN1Q2MV58 587 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 ALG11Q2TAA5 492 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 ZNF284Q2VY69 593 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 FILIP1LQ4L180 1135 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 CFAP58Q5T655 872 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 AP1ARQ63HQ0 302 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 JADE1Q6IE81 842 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 HEPHL1Q6MZM0 1159 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 TSSK4Q6SA08 328 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 C6orf89Q6UWU4 347 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 C11orf57Q6ZUT1 292 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 RUFY3Q7L099 469 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 CHST9Q7L1S5 443 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 ENOSF1Q7L5Y1 443 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 SDCCAG8Q86SQ7 713 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 IQCA1Q86XH1 822 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 TICAM1Q8IUC6 712 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 DENND6AQ8IWF6 608 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 RBFAQ8N0V3 343 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 SRBD1Q8N5C6 995 aaKnown RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 LSMEM1Q8N8F7 131 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 C1orf131Q8NDD1 294 aaKnown RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 GJC3Q8NFK1 279 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 SLC35F5Q8WV83 523 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 ZFAND2BQ8WV99 257 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 N4BP2L2Q92802 583 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 OTULINQ96BN8 352 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 PABPC5Q96DU9 382 aaKnown RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 MMABQ96EY8 250 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 BICD1Q96G01 975 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 CALML4Q96GE6 196 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 CCDC34Q96HJ3 373 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 PGAM5Q96HS1 289 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 TMEM68Q96MH6 324 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 AGAP3Q96P47 875 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 WDFY2Q96P53 400 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 BBS4Q96RK4 519 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 GFM1Q96RP9 751 aaKnown RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 TSPAN18Q96SJ8 248 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 YME1L1Q96TA2 773 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 JPH2Q9BR39 696 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 MXRA8Q9BRK3 442 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 NUF2Q9BZD4 464 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 FTOQ9C0B1 505 aaKnown RBP eCLIP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 BICC1Q9H694 974 aaKnown RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 SH2D4AQ9H788 454 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 MVB12BQ9H7P6 319 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 POLR1BQ9H9Y6 1135 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 EBF2Q9HAK2 575 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 KIF9Q9HAQ2 790 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 SLC6A13Q9NSD5 602 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 TRMT1Q9NXH9 659 aaKnown RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 ANKRD10Q9NXR5 420 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 VPS18Q9P253 973 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 BLOC1S6Q9UL45 172 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 ODF2LQ9ULJ1 636 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 SMC3Q9UQE7 1217 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 AAR2Q9Y312 384 aaKnown RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 LSM4Q9Y4Z0 139 aaKnown RBP2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 USP16Q9Y5T5 823 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 SNX8Q9Y5X2 465 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 PNPLA6Q8IY17 1366 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 MYO3AQ8NEV4 1616 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 CEMIPQ8WUJ3 1361 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 RAD54L2Q9Y4B4 1467 aa2.45□□□□□ -2.02
HMGB3P2-201ENST00000411913 GLI2P10070 1586 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 CDC42BPGQ6DT37 1551 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 NEDD4P46934 1319 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 RPGRIP1LQ68CZ1 1315 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 SH3TC1Q8TE82 1336 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 KDM5AP29375 1690 aaKnown RBP2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 ZC3H13Q5T200 1668 aaKnown RBP2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 PLCH2O75038 1416 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 IQGAP3Q86VI3 1631 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 FAM237AA0A1B0GTK4 181 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 A0A1B0GUA9 196 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 ERICH2A1L162 156 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 FAM172BPA6NC97 362 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 GOLGA6L9A6NEM1 432 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 LRRIQ3A6PVS8 624 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 CDRT15L2A8MXV6 281 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 B4DLN1 442 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 IFNL4K9M1U5 179 aa2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 EIF3HO15372 352 aaKnown RBP eCLIP2.44□□□□□ -2.02
HMGB3P2-201ENST00000411913 HCRTR2O43614 444 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms